Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0001 ATGAGAATACGACAGGTCACTCATCAACTTAGCTGGAGACACGACTTATTCGCCTCTGCAGAATATACGCATTCGTTTCTTTTCTTTTCCTTTCCACCTCCACGTTCCTCTCCTCATCCTCCATTTCCTTTCATTTCCCCAAGTGGGAATCCGAAGTTGCAAGACGCCATGACTGAAATCGTGACGGAAACTGCGAATGCTGAAGAAACGGTTCCAGTTCCCCCAATTGAGATTCCAGAAAAAGTTCCCATGCCTCTTTATTCCTCCCATCCACCTCTTAATGAGAGGATTATTTCATCCATGACCAGGAGATCTGTTGCTGCACACCCTTGGCATGACCTTGAGATTGGACCAGGAGCTCCACAGATCTTCAACTGTGTGGTTGAGATTGGGAAAGGAAACAAAGTCAAATATGAACTTGACAAGAAGTCAGGACTTATTAAGGTGGATCGTGTGCTTTACTCATCAGTTGTGTATCCCCACAACTATGGCTTTATCCCACGAACTATCTGTGAGGACGGTGATCCCATGGATGTCTTGGTTATTATGCAGGAGCCAGTTCTTCCAGGGTGCTTTCTTCGTGCCAAAGCTATTGGTCTCATGCCTATGATTGACCAGGGTGAGAAAGATGACAAAATAATCGCTGTCTGTGCTGATGATCCGGAGTATAGACACTACAATGACATCAAGGAGCTTCCTCCACATCGTTTGGCTGAGATCCGTCGTTTCTTCGAAGACTATAAGAAGAATGAGAACAAGGAAGTTGCTGTAAATGACTTTCTGCCTGCTTCAACTGCATTCGAAGCGATCAAGCACTCCATGACTCTATATGCTGACTATATAGTGGAGAGCTTAAGGCGGTAA 864 0.4514 MRIRQVTHQLSWRHDLFASAEYTHSFLFFSFPPPRSSPHPPFPFISPSGNPKLQDAMTEIVTETANAEETVPVPPIEIPEKVPMPLYSSHPPLNERIISSMTRRSVAAHPWHDLEIGPGAPQIFNCVVEIGKGNKVKYELDKKSGLIKVDRVLYSSVVYPHNYGFIPRTICEDGDPMDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASTAFEAIKHSMTLYADYIVESLRR* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0001 287 ProSitePatterns Inorganic pyrophosphatase signature. 173 179 - -
Ahy6g0001 287 PANTHER INORGANIC PYROPHOSPHATASE 93 286 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ahy6g0001 287 Pfam Inorganic pyrophosphatase 126 277 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ahy6g0001 287 PANTHER BNAC07G03580D PROTEIN 93 286 - -
Ahy6g0001 287 Hamap Inorganic pyrophosphatase [ppa]. 122 278 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ahy6g0001 287 CDD pyrophosphatase 122 274 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ahy6g0001 287 Gene3D Inorganic pyrophosphatase 105 283 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ahy6g0001 287 SUPERFAMILY Inorganic pyrophosphatase 102 282 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0001 Ahy-Chr6 73922 77675 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0001 K01507 - mnt:21392266 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1487 16 32099519 32103419 Ahy6g0001 6 73922 77675 hybridization
Ahy6g0001 6 73922 77675 Ahy12g1152 12 30385348 30389323 PCT
Ahy6g0001 6 73922 77675 Ahy2g1040 2 26198380 26202415 PCT
Ahy12g1152 12 30385348 30389323 Ahy6g0001 6 73922 77675 PCT
Ahy2g1040 2 26198380 26202415 Ahy6g0001 6 73922 77675 PCT