Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1152 ATGTCTCCACCAATTGAGTCCCCAGCCAAGGTTGCCATAACTCAGCATTCTAAACCTCCACCACTTAATGAGAGGATCATTTCATCCATGACAAGGAGATCCGTTGCTGCACACCCTTGGCATGATCTTGAAATAGGACCTGAAGCTCCAAAGATCTTTAATTGTGTGGTTGAAATTGGAAAAGGAAGCAAGGTGAAATATGAACTTGACAAGAAAACTGGACTTATCAAGGTTGATCGTGTGCTTTACTCATCAGTTGTATATCCTCACAACTATGGGTTTATCCCACGTACCATTTGCGAGGATAGTGACCCCATGGACGTCTTGGTTATTATGCAGGAGCCAGTTCTTCCCGGTTGCTTCCTTAGGGCCAAAGCTATTGGACTTATGCCTATGATTGATCAGGGTGAGAAAGATGACAAGATCATCGCCGTGTGCGCCGATGATCCCGAATATCGCCATTATAATGACATCAAGGAGCTTCCACCACATCGTCTGGCTGAAATCCGTCGCTTTTTCGAAGACTACAAGAAGAATGAGAACAAGGAAGTTGCGGTAAACGACTTTCTTCCTGCCACAACTGCTTATGAAGCAATCAAGCACTCCATGACCCTTTATGCGGACTACATTGTGGAGAGCTTGAGGCGGTAG 651 0.4531 MSPPIESPAKVAITQHSKPPPLNERIISSMTRRSVAAHPWHDLEIGPEAPKIFNCVVEIGKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPATTAYEAIKHSMTLYADYIVESLRR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1152 216 PANTHER INORGANIC PYROPHOSPHATASE 22 215 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ahy12g1152 216 CDD pyrophosphatase 52 203 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ahy12g1152 216 SUPERFAMILY Inorganic pyrophosphatase 30 211 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ahy12g1152 216 ProSitePatterns Inorganic pyrophosphatase signature. 102 108 - -
Ahy12g1152 216 PANTHER BNAC07G03580D PROTEIN 22 215 - -
Ahy12g1152 216 Pfam Inorganic pyrophosphatase 55 206 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ahy12g1152 216 Hamap Inorganic pyrophosphatase [ppa]. 51 207 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ahy12g1152 216 Gene3D Inorganic pyrophosphatase 34 212 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ahy12g1152 216 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1152 Ahy-Chr12 30385348 30389323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1152 K01507 - pop:7454911 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1152 12 30385348 30389323 Ahy2g1040 2 26198380 26202415 hybridization
Ahy16g1487 16 32099519 32103419 Ahy12g1152 12 30385348 30389323 PCT
Ahy6g0001 6 73922 77675 Ahy12g1152 12 30385348 30389323 PCT
Ahy12g1152 12 30385348 30389323 Ahy16g1487 16 32099519 32103419 PCT
Ahy12g1152 12 30385348 30389323 Ahy6g0001 6 73922 77675 PCT