Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3209 ATGGCTCAGATTGTGGCAACAACACGATCCATTCAGAGCACCCTTTTGTGCCCCACTTCAGGATCTGCAAATGAAAGAGCGCGTAATCTCTTAAAGCCTCCAACTTTTTCCTCCAAGGTTTTCTCATCAAATGGGATCAACAAGTGCCCCCAAGATGCATTCAGAAGCTGCAGGATCAATGCGAGGAAATCTGCATCTGTTGAAGTTATCCCTGTTTCCGCTGAAGATGATCCAAAGATTGAGGAGCAATTGCGTGGTGTGCCGCAACTTCTTGATGCTTCGAATGGAATGTGGTCGAAGCCGACGTTTAGGCGCAAGACGAAGATAGTTTGTACTATTGGTCCTTCCACCAATACCAAGGAAATGATTTGGAAGCTGGCTGAGGCCGGCATGAATGTGGCTCGCCTCAATATGTCTCATGGAGACCATGCTTCACATCAGAAAGTTATTGACTTGGTTAAAGAATATAATGCACAGGCAAAGGACAATGTAATTGCAATTATGCTTGATACTAAGGGTCCTGAGGTGAGGAGTGGGGATCTGCCACAACCAATCATGCTATCAACTGGACAGGAATTCACTTTTACTATCCAAAGAGGTGTTGGAACTGCAGATTGTGTTAGTGTGAACTATGATGATTTCGTCAATGATGTGGAACCTGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCGTTGATGGTAAAATCTAAGACAGAAGATTCCGTTAAATGTGAAGTTGTTGACGGAGGAGAGCTCAAGTCAAGAAGGCATTTAAATGTTAGAGGAAAAAGTGCAACACTTCCTTCCATCACTGAGAAGGATTGGGATGATATCAAATTTGGAGTGGATAACCAAGTTGATTTCTATGCTGTCTCCTTTGTTAAGAGTGCTGAAGTTGTGCATGAACTGAAGAATTATTTGAAAAACTCTGGAACTGATATACATGTCATCGTAAAGATTGAAAGTGCAGACTCTATACCAAATTTGCATTCCATTATCACTGCGTCTGACGGGGCTATGGTTGCCAGAGGAGATCTTGGTGCTGAGCTTCCTATTGAAGAGGTTCCACTTTTGCAGGAAGAGATAATCAACTTATGCCGTAGCATGGGAAAAGCTGTTATTGTGGCCACAAATATGCTGGAAAGCATGATTGTTCACCCAACACCAACCAGAGCGGAAGTATCGGACATAGCAATTGCTGTTCGAGAAGGTTCTGATGCAATAATGCTGTCTGGAGAAACTGCCCACGGAAAGTATCCGCTAAAAGCTGTGAAAGTAATGCACACAGTTGCGTTACGTACAGAGGCTACTATACCAGGGGGTCAAATGCCGCCTAATATCGGTCAAGTGTTCAAGAACCACATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCTAACACCCTTGGCACTGCAACCGTCGTCTTTACGAGAACGGGTTTCATGGGCATCCTACTGAGCCACTATCGACCTTCTGGGACCATATTTGCCTTTACTGATGATAAACGAGTACAACAGAGATTGGCACTGTATCAAGGAGTCTGCCCTATATACATGGAATTTTGCGATGATTCTGAAGCGACCTTTAGACGAGCCCTGGATTTGTTGAAGAATCAAGGAATGGTGAAAGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGTAGGCAACCTATATGGAGGTCCCAAACCACACACAATATCCAAGTTCGAAAAGTGTAA 1725 0.4383 MAQIVATTRSIQSTLLCPTSGSANERARNLLKPPTFSSKVFSSNGINKCPQDAFRSCRINARKSASVEVIPVSAEDDPKIEEQLRGVPQLLDASNGMWSKPTFRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQAKDNVIAIMLDTKGPEVRSGDLPQPIMLSTGQEFTFTIQRGVGTADCVSVNYDDFVNDVEPGDMLLVDGGMMSLMVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKSAEVVHELKNYLKNSGTDIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDAIMLSGETAHGKYPLKAVKVMHTVALRTEATIPGGQMPPNIGQVFKNHMSEMFAYHATMMSNTLGTATVVFTRTGFMGILLSHYRPSGTIFAFTDDKRVQQRLALYQGVCPIYMEFCDDSEATFRRALDLLKNQGMVKEGEEVALVQSGRQPIWRSQTTHNIQVRKV* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3209 574 Pfam Pyruvate kinase, alpha/beta domain 464 555 IPR015795 -
Ahy5g3209 574 SUPERFAMILY PK beta-barrel domain-like 174 265 IPR011037 -
Ahy5g3209 574 Gene3D - 175 268 IPR015806 GO:0004743|GO:0006096
Ahy5g3209 574 Gene3D - 107 432 IPR040442 -
Ahy5g3209 574 PRINTS Pyruvate kinase family signature 344 368 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy5g3209 574 PRINTS Pyruvate kinase family signature 394 412 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy5g3209 574 PRINTS Pyruvate kinase family signature 317 343 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy5g3209 574 PRINTS Pyruvate kinase family signature 413 429 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy5g3209 574 PRINTS Pyruvate kinase family signature 287 301 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy5g3209 574 PRINTS Pyruvate kinase family signature 369 393 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy5g3209 574 PRINTS Pyruvate kinase family signature 163 179 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy5g3209 574 TIGRFAM pyruv_kin: pyruvate kinase 105 574 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy5g3209 574 SUPERFAMILY PK C-terminal domain-like 423 574 IPR036918 -
Ahy5g3209 574 PANTHER PLASTIDIAL PYRUVATE KINASE 2 53 574 - -
Ahy5g3209 574 Gene3D - 447 574 IPR036918 -
Ahy5g3209 574 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 96 439 IPR015813 GO:0003824
Ahy5g3209 574 ProSitePatterns Pyruvate kinase active site signature. 315 327 IPR018209 GO:0004743|GO:0006096
Ahy5g3209 574 PANTHER PYRUVATE KINASE 53 574 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy5g3209 574 Pfam Pyruvate kinase, barrel domain 105 440 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3209 Ahy-Chr5 113996163 114000727 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3209 K00873 - gmx:100815822 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3622 15 158987889 158992540 Ahy5g3209 5 113996163 114000727 hybridization
Ahy5g3209 5 113996163 114000727 Ahy19g3599 19 158582172 158586961 PCT
Ahy5g3209 5 113996163 114000727 Ahy9g2013 9 108452858 108457671 PCT
Ahy19g3599 19 158582172 158586961 Ahy5g3209 5 113996163 114000727 PCT
Ahy9g2013 9 108452858 108457671 Ahy5g3209 5 113996163 114000727 PCT