Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3599 ATGTCTCAGGTAGTAGCCACTCGATCCATTAACATCACCCTCTCACGCCCCAGTTCCGGATCTGCACCTCACAGGCCGCAAACTTTCTTAAAGCCTCCAACTTTTGCTTCCAAAGTGTTCCAGCCACAAGGGAACATTGACGAGTCCTTCAAAGCTTCCTTCACAACCTGCCACGTCATCGACGCTAGGAAACCTACACCTACGGAAGTTGTGCCCGTCTCACCCGAGGATGACCAAAAGATTGAGGAAGAGTTGCAGCACTTGCGTGGCTTACAACAGCTTGGTGACACTGCTGTCGGAATGTGGTCAAAGCCTACGTTTAGGAGAAAGACTAAGATTGTTTGCACCATTGGGCCTTCTACGGATACAAGGGAAATGATTTGGAAGCTGGCCGAGGCTGGGATGAATGTTGCGCGTTTGAATATGTCTCATGGTGACCATGCTTCTCATCAGAAAGTTATCGATTTGGTAAAGGACTATAATGCACAATCCAAGGATAATGTAATTGCAATAATGCTCGACACCAAGGGTCCTGAGGTTAGGAGTGGGGACCTGCCACAACCAATTACATTAGAACCTGGGCAAGAGTTCACTTTCACTATCCGGAGGGGTGTCGGAACCACAGATTGTGTTAGCGTTAACTATGATGATTTTGTTAATGATGTAGCAGTTGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCATTGATGGTAAAGTCTAAGACCGAGGATTCTGTAAAATGTGAAGTAGTTGATGGAGGAGAGCTTAAATCGAGGAGACATTTGAATGTTAGAGGAAAAAGCGCAACATTGCCTTCAATCACTGAGAAGGACTGGGATGACATTAAATTTGGAGTGGACAACCAAGTTGACTTTTATGCCGTTTCCTTTGTTAAGGATGCACAAGTAGTTCATGAACTGAAGAACTATCTGAAAAGCTGTGGTGCCGATATACATGTCATTGTAAAAATTGAAAGTGCAGACTCCGTTCCGAACTTGCATTCAATAATTACAGCATCTGATGGGGCTATGGTTGCAAGAGGAGATCTTGGGGCTGAGCTACCTATTGAGGAAGTTCCACTTTTGCAGGAGGAGATAATCAGAATATGCCGTAGCATGGGAAAGGCTGTGATTGTTGCAACAAATATGCTTGAAAGCATGATTGTTCACCCAACCCCAACCAGAGCAGAGGTATCTGATATTGCAATTGCTGTTCGAGAAGGTTCTGATGGAATAATGCTTTCTGGTGAAACTGCTCATGGAAAGTTCCCACTAAAAGCTGTGAAAGTAATGCACACAGTAGCATTACGGACAGAAGCCACTATACCAGGTAGTCAGATGCCACCTAATATTGGTCAAGTATTCAAGAACCACATGAGCGAGATGTTTGCATACCATGCAACCATGATGTCCAACACCCTTGGAACCTCAACTGTTGTCTTCACTAGATCAGGCTTCATGGCTATTCTTCTAAGCCACTATCGACCAACTGGCACCATATTTGCTTTTACAGACCAGAAGCGGATACAGCAGCGGCTGGCTTTGTATCAAGGAGTTTGTCCTATATACATGGAATTCTCTGATGATGCTGAAGAGACATTCAAAAGAGCCTTGGATTTGTTGCAGAGGCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGAAGACAGCCCATATGGAGGTTCCAATCCACTCACAACATCCAGGTCAGAACAGTGTAA 1737 0.4473 MSQVVATRSINITLSRPSSGSAPHRPQTFLKPPTFASKVFQPQGNIDESFKASFTTCHVIDARKPTPTEVVPVSPEDDQKIEEELQHLRGLQQLGDTAVGMWSKPTFRRKTKIVCTIGPSTDTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKDYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLEPGQEFTFTIRRGVGTTDCVSVNYDDFVNDVAVGDMLLVDGGMMSLMVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSVPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGSQMPPNIGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMAILLSHYRPTGTIFAFTDQKRIQQRLALYQGVCPIYMEFSDDAEETFKRALDLLQRQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRTV* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3599 578 ProSitePatterns Pyruvate kinase active site signature. 319 331 IPR018209 GO:0004743|GO:0006096
Ahy19g3599 578 Gene3D - 451 578 IPR036918 -
Ahy19g3599 578 MobiDBLite consensus disorder prediction 1 25 - -
Ahy19g3599 578 SUPERFAMILY PK beta-barrel domain-like 178 269 IPR011037 -
Ahy19g3599 578 Pfam Pyruvate kinase, alpha/beta domain 466 558 IPR015795 -
Ahy19g3599 578 Gene3D - 111 436 IPR040442 -
Ahy19g3599 578 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 100 443 IPR015813 GO:0003824
Ahy19g3599 578 SUPERFAMILY PK C-terminal domain-like 427 578 IPR036918 -
Ahy19g3599 578 Gene3D - 179 272 IPR015806 GO:0004743|GO:0006096
Ahy19g3599 578 PANTHER PYRUVATE KINASE 52 578 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy19g3599 578 PANTHER PLASTIDIAL PYRUVATE KINASE 2 52 578 - -
Ahy19g3599 578 TIGRFAM pyruv_kin: pyruvate kinase 109 578 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy19g3599 578 Pfam Pyruvate kinase, barrel domain 109 445 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy19g3599 578 PRINTS Pyruvate kinase family signature 167 183 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy19g3599 578 PRINTS Pyruvate kinase family signature 398 416 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy19g3599 578 PRINTS Pyruvate kinase family signature 291 305 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy19g3599 578 PRINTS Pyruvate kinase family signature 348 372 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy19g3599 578 PRINTS Pyruvate kinase family signature 373 397 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy19g3599 578 PRINTS Pyruvate kinase family signature 321 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ahy19g3599 578 PRINTS Pyruvate kinase family signature 417 433 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3599 Ahy-Chr19 158582172 158586961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3599 K00873 - gmx:100818193 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3599 19 158582172 158586961 Ahy19g3599 19 158582172 158586961 ECH
Ahy19g3599 19 158582172 158586961 Ahy9g2013 9 108452858 108457671 hybridization
Ahy15g3622 15 158987889 158992540 Ahy19g3599 19 158582172 158586961 PCT
Ahy5g3209 5 113996163 114000727 Ahy19g3599 19 158582172 158586961 PCT
Ahy19g3599 19 158582172 158586961 Ahy15g3622 15 158987889 158992540 PCT
Ahy19g3599 19 158582172 158586961 Ahy5g3209 5 113996163 114000727 PCT