Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3182 ATGAACACTCTTATTTGTTCATCAAACCCAACTCTTCATCTCTCAAATCTTCCATCAAGGAAACCAAATTTCTCACCTTTAAGCCCCAAACTAAGTTTACGAAAACTCAATTACCCCTTAAGCACATTAAATCCACCACATGCTTATAATGCCAAGGGATTTTCAAGTGTTGAGAGTGAACTTGTGAGTAGCAAGAATAACAATCCCAACAAGAACAAAGATAAAGATGATGAGATTCCTAGGGAAGTGTTCAACAGGATCATAGTTAGAATATTGGTGTCTGTTTTGGCACCAATGGGTTTAGGGTTGGGGATTTTGTATGTGTTTGGAGAACTTAAGGTGAGACACATATGGGACATGCCCATGTGGGTGCCATTCATGACAACATTCTTGACATTTGGAGCTTCCACTCTTGGGATTGCTTATGGGGCACTCTCCACAAGTTTGGATAAAGATAGGGAAGGTACATTTCTTGGCCTCAATGAACTTCAGAACAATTGGACTGAGATGTGGCAAGAGGAGAATCAGGAGGATCAAAGTTAG 543 0.4033 MNTLICSSNPTLHLSNLPSRKPNFSPLSPKLSLRKLNYPLSTLNPPHAYNAKGFSSVESELVSSKNNNPNKNKDKDDEIPREVFNRIIVRILVSVLAPMGLGLGILYVFGELKVRHIWDMPMWVPFMTTFLTFGASTLGIAYGALSTSLDKDREGTFLGLNELQNNWTEMWQEENQEDQS* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3182 180 PANTHER PROTEIN PAM68, CHLOROPLASTIC 1 178 IPR021855 -
Ahy5g3182 180 Pfam Photosynthesis affected mutant 68 47 173 IPR021855 -
Ahy5g3182 180 PANTHER EXPRESSED PROTEIN 1 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3182 Ahy-Chr5 113708764 113709555 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3182 - - gmx:100782877 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3597 15 158716350 158717185 Ahy5g3182 5 113708764 113709555 hybridization