Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3597 ATGAACACTCTTATTTGTTCATCAAACCCAACTCTTCATCTCTCAAATCTTCCATCAAGGAAACCAAATTTCTCACCTTTAAGCCCCAAACTAAGTTTAGGAAAACTCAATTACCCCTTAAGCACATTAAATCCACCACATGCTTATAATGCCAAGGGATTTTCAAGTGTTGAGGGTGAACTTGTGAGTAGCAAGAATAACAATCCCAACAAGAACAAAGATAAAGATGATGAGATTCCTAGGGAAGTGTTCAACAGGATCATAGTTAGAATATTGGTGTCTGTTTTGGCACCAATGGGTTTAGGGTTGGGAATTTTGTATGTGTTTGGAGAACTTAAGGTGAGACACATATGGGACATGCCCATGTGGGTGCCATTCATGACAACATTCTTGACATTTGGAGCTTCCACTCTTGGGATTGCTTATGGGGCACTCTCCACAAGTTTGGATAAAGATAGGGAAGGTACATTTCTTGGCCTCAATGAACTTCAGAACAATTGGACTGAGATGTGGCAAGAGGAGGATCAGGAGGATCAAAGTTAG 543 0.4052 MNTLICSSNPTLHLSNLPSRKPNFSPLSPKLSLGKLNYPLSTLNPPHAYNAKGFSSVEGELVSSKNNNPNKNKDKDDEIPREVFNRIIVRILVSVLAPMGLGLGILYVFGELKVRHIWDMPMWVPFMTTFLTFGASTLGIAYGALSTSLDKDREGTFLGLNELQNNWTEMWQEEDQEDQS* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3597 180 Pfam Photosynthesis affected mutant 68 63 173 IPR021855 -
Ahy15g3597 180 PANTHER EXPRESSED PROTEIN 1 178 - -
Ahy15g3597 180 PANTHER PROTEIN PAM68, CHLOROPLASTIC 1 178 IPR021855 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3597 Ahy-Chr15 158716350 158717185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3597 - - gmx:100782877 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3597 15 158716350 158717185 Ahy15g3597 15 158716350 158717185 ECH
Ahy15g3597 15 158716350 158717185 Ahy5g3182 5 113708764 113709555 hybridization