Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3146 ATGTCTGAAGCTGCTATGGCAGTCATGAAACCTGAGATGAAATCTTATATATGGCTTAAAACTGTGGATGGTTCTATTCAACAAGTAGAGCAAGATGTAGCCATGTTTTGCCCCATGATTTTCCAGGAAATACTTAAGACAGGCATGGGATCTTCCAAAACTTATGCCATATCTCTTCCACAACGTGTCAATCCTTCAATCTTGGGTTTAATACTTGACTACTGTCGTTTCCACCAAGTGCCAGGCCACTCTAATAAGGAGCGGAAAACCTTTGATGAAAAGTTTATTAGGATGGACACAAAGAAGTTATGTGAATTGACATCTGCTGCTGATAGCCTCCAATTGAAGCCTTTGGTTGACCTGACCAGCCGAGCACTTGCTCGGATTATAGAAGGAAAAACACCAGAGGAGATTCGTGAAACATTTCATTTGCCTGATGACCTCACTGAGGAGGAGAAACTCAAGCCTCTTAGAAATGTAACTGATGATCCACGTATTCGACTTCTAAACAGATTATATGCTAGAAAAAGGAAAGAGTTGAAAGAAAAGAAGAAACTAAAGGAGTTGGATTCTGTTCCCTTTGCATGTCACAATCGCAATGTTGACAATGCCTTAAAGGCCTCTCCAAGCAAACACTCACAGACGCAAGATTTACCTCCCATGAGTTTTTCTCCAAAGCTCGAGTTTATTGATGGTGATCTTGATGATGAATTAGATCCTGCAATGAAGGAGGAACTTGACAGGGAAGTGGAAGATTTTGCTCGAAGATTGAATTCAGATTGGCCCGAAAGGATGCAAATTTTATCTTTGGGCCAAGACAGAAGACTAGTTCCAATTTCTATGAATAGCAATGTTTCCACACGCATCTTCACAGGTATGGGTTAA 885 0.4079 MSEAAMAVMKPEMKSYIWLKTVDGSIQQVEQDVAMFCPMIFQEILKTGMGSSKTYAISLPQRVNPSILGLILDYCRFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLKPLRNVTDDPRIRLLNRLYARKRKELKEKKKLKELDSVPFACHNRNVDNALKASPSKHSQTQDLPPMSFSPKLEFIDGDLDDELDPAMKEELDREVEDFARRLNSDWPERMQILSLGQDRRLVPISMNSNVSTRIFTGMG* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3146 294 PANTHER SKP1 1 183 IPR016897 GO:0006511
Ahy5g3146 294 Pfam Skp1 family, dimerisation domain 116 153 IPR016072 GO:0006511
Ahy5g3146 294 Gene3D Potassium Channel Kv1.1; Chain A 10 159 IPR011333 -
Ahy5g3146 294 SUPERFAMILY Skp1 dimerisation domain-like 90 157 IPR036296 GO:0006511
Ahy5g3146 294 PANTHER OS03G0107000 PROTEIN 1 183 - -
Ahy5g3146 294 SMART skp1_3 14 115 IPR001232 GO:0006511
Ahy5g3146 294 Coils Coil 166 189 - -
Ahy5g3146 294 SUPERFAMILY POZ domain 15 79 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3146 Ahy-Chr5 113282440 113285963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3146 - - gmx:100808004 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3555 15 158331870 158335306 Ahy5g3146 5 113282440 113285963 hybridization