Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3555 ATGTCTGAAGCTGCTATGGCAGTCATGAAACCTGAGATGAAATCTTATATATGGCTTAAAACTGTGGATGGTTCTATTCAACAAGTAGAGCAAGATGTAGCCATGTTTTGCCCCATGATTTTCCAGGAAATACTTAAGACAGGCATGGGATCTTCCAAAACTTATGCCATATCTCTTCCACAACGTGTCAATCCTTCAATCTTGGGTTTAATACTTGACTACTGTCGTTTCCACCAAGTGCCAGGCCACTCTAATAAGGAGCGGAAAACCTTTGATGAAAAGTTTATTAGGATGGACACAAAGAAGTTATGTGAATTGACATCTGCTGCTGATAGCCTCCAATTGAAGCCTTTGGTTGACCTGACCAGCCGAGCACTTGCTCGGATTATAGAAGGAAAAACACCAGAGGAGATTCGTGAAACATTTCATTTGCCTGATGACCTCACTGAGGAGGAGAAACTCGAGCCTCTTAGAAATGTAACTGATGATCCACGTATTCGACTTCTAAACAGATTATATGCTAGAAAAAGGAAAGAGTTGAAAGAAAAGAAGAAACTAAAGGAGTTGGATTCTGTTCCCTTTGCATGTCACAATCGCAATGTTGACAATGCCTTAAAGGCCTCTCCAAGCAAACACTCACAGACGCAAGATTTACCTCCCATGAGTTTTTCTCCAAAGCTCGAGTTTATTAATGGTGATCTTGATGATGAATTAGATCCTGCAATGAAGGAGGAACTTGACAGGGAAGTGGAAGATTTTGCTCGAAGATTAAATTCAGATTGGCCCGAAAGGATGCAAATTTTATCTTTGGGCCAAGACAGAAGACTAGTTCCAATTTCTATGAATAGCAATGTTTCCACACGCATCTTCACAGGTATGGGTTAA 885 0.4068 MSEAAMAVMKPEMKSYIWLKTVDGSIQQVEQDVAMFCPMIFQEILKTGMGSSKTYAISLPQRVNPSILGLILDYCRFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNVTDDPRIRLLNRLYARKRKELKEKKKLKELDSVPFACHNRNVDNALKASPSKHSQTQDLPPMSFSPKLEFINGDLDDELDPAMKEELDREVEDFARRLNSDWPERMQILSLGQDRRLVPISMNSNVSTRIFTGMG* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3555 294 Pfam Skp1 family, dimerisation domain 116 153 IPR016072 GO:0006511
Ahy15g3555 294 SUPERFAMILY Skp1 dimerisation domain-like 90 157 IPR036296 GO:0006511
Ahy15g3555 294 SMART skp1_3 14 115 IPR001232 GO:0006511
Ahy15g3555 294 PANTHER SKP1 1 183 IPR016897 GO:0006511
Ahy15g3555 294 Coils Coil 166 189 - -
Ahy15g3555 294 Gene3D Potassium Channel Kv1.1; Chain A 10 160 IPR011333 -
Ahy15g3555 294 PANTHER OS03G0107000 PROTEIN 1 183 - -
Ahy15g3555 294 SUPERFAMILY POZ domain 15 79 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3555 Ahy-Chr15 158331870 158335306 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3555 - - gmx:100808004 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3555 15 158331870 158335306 Ahy15g3555 15 158331870 158335306 ECH
Ahy15g3555 15 158331870 158335306 Ahy5g3146 5 113282440 113285963 hybridization