Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3098 ATGGAAGACCCCAGCTCCGGCGACTGTTTGCCACAAGGTTGGACTGTGGAAGTTAAAGTCAGAAAGAATGGTAGGAGAGACAAGTACTACATAGATCCTGCAAGCGGCTATGTGTTCCGCTCGCTAAGAGACGTTGATCGTTATCTTGAATCTGGGGAAATAGGAAGGAACGCGTTCAAGCCGAAAGACAACGGCGATACAGAGTTAAAAGCTGACAAGTTCTCTCCAGTATCGACCACAAAACCAACTGTATCTGTTAGCATGGGTTTGAGCTCAGATTCAGACAGGATATCCAATGATCAACAGGATCAAAAGCCTGTGTGTTCAGCAGAATATGCATCTACACCAATCTCTGAAAATACTTCTGCTCAGTGCACGATGGGGACAAAATCGACCACCTTAGGCTCGGATCAGATAGAAGGGAAGGCTAGTGAAGAAGATTCTCAAGCAAAGCAACTTCCCCAAAATGAACAAATGGGAAATGAAAAATCTCAAAAGCGACAAAGGCGTAAAAAGGAGATCAATCTTCCTCGCCGTTCCTCAAAGCGCCTTGCTGGAATTCAGCTTGATCCAGTTCCAGAACTTGTAACAAGAAGCCGAGCACGCCGAGCTGCAGTTAAACAATCAGGCCAGGGAGAAACCATCAGAAATGAGGATAAATCCTCTAACAGCTTGCCTAATGCCGCAGCGAAAAGGATGAATGTGCCTGATGGTGGATCAGAAACAAAGTGCAAATCTGAGAGTGCAGCAAACATGCTACAGTCAACTAAGTTCTCTACTCCAGAAAGGCTTCCCAACAAGACTACACAAGAGGATGGAAGCAACAAGGATCAAGAATGCTTCTCATTTTGGCCTCAAGAGAACAATGCTACTATGAAAGATCATGTGCTCGATTACTCCCATGAGTTTCCTCTTAAAGAACTGCTGCAGGACCCATGCATTGCATTTGCAATACAAACTCTCACCGGCGAAACATTCGAAATGCAAGTATCCGGCGAATCAAGTGAGCATTCTGAAGCTCTTACTGCAAATATGGGTGGTGATGACAAGGGAGGGTGCAATGTGTTCTCACATCCAGAAAACTATGCTATTATACCACAACAACATGCTGGTGCAGCCGAAACAGCCATCAAGACTAATGAAAACCAAACAGGATCATCATCTTCTGAAAAGGAACCTGATGTTTCATGGATGGATCCATGCATTGAATTTGCAATCAAAACGCTCACTGGCTCTATCCCGTTAGATTCAGAGCAGAATCCTAAGAACTGCATTCAACAGCAGCTTTGCTCATCAAACACAAATCCCAGCGAAATGGCCTATAAACAGGAACCAATGTTTAAAGAGTCTTTTGTGGATCCAACAGCATCATCAACACACAAGAAATGTTGA 1392 0.4425 MEDPSSGDCLPQGWTVEVKVRKNGRRDKYYIDPASGYVFRSLRDVDRYLESGEIGRNAFKPKDNGDTELKADKFSPVSTTKPTVSVSMGLSSDSDRISNDQQDQKPVCSAEYASTPISENTSAQCTMGTKSTTLGSDQIEGKASEEDSQAKQLPQNEQMGNEKSQKRQRRKKEINLPRRSSKRLAGIQLDPVPELVTRSRARRAAVKQSGQGETIRNEDKSSNSLPNAAAKRMNVPDGGSETKCKSESAANMLQSTKFSTPERLPNKTTQEDGSNKDQECFSFWPQENNATMKDHVLDYSHEFPLKELLQDPCIAFAIQTLTGETFEMQVSGESSEHSEALTANMGGDDKGGCNVFSHPENYAIIPQQHAGAAETAIKTNENQTGSSSSEKEPDVSWMDPCIEFAIKTLTGSIPLDSEQNPKNCIQQQLCSSNTNPSEMAYKQEPMFKESFVDPTASSTHKKC* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3098 463 MobiDBLite consensus disorder prediction 119 139 - -
Ahy5g3098 463 MobiDBLite consensus disorder prediction 210 229 - -
Ahy5g3098 463 Pfam Methyl-CpG binding domain 9 53 IPR001739 GO:0003677
Ahy5g3098 463 MobiDBLite consensus disorder prediction 119 278 - -
Ahy5g3098 463 MobiDBLite consensus disorder prediction 54 106 - -
Ahy5g3098 463 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13 8 451 - -
Ahy5g3098 463 SUPERFAMILY DNA-binding domain 9 54 IPR016177 GO:0003677
Ahy5g3098 463 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1 74 IPR001739 GO:0003677
Ahy5g3098 463 MobiDBLite consensus disorder prediction 244 268 - -
Ahy5g3098 463 MobiDBLite consensus disorder prediction 54 70 - -
Ahy5g3098 463 PANTHER OS04G0193200 PROTEIN 8 451 IPR038945 -
Ahy5g3098 463 Gene3D - 1 111 - -
Ahy5g3098 463 CDD MBD 8 75 - -
Ahy5g3098 463 MobiDBLite consensus disorder prediction 73 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3098 Ahy-Chr5 112672955 112677262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3098 - - adu:107491164 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3509 15 157839339 157843603 Ahy5g3098 5 112672955 112677262 hybridization