Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3509 ATGGAAGACCCCAGCTCCGGTGACTGTTTGCCACAAGGTTGGACTGTGGAAGTTAAAGTCAGAAAGAATGGTAGGAGAGACAAGTACTACATAGATCCTGCAAGCGGCTATGTGTTCCGCTCGCTAAGAGACGTTGATCGTTATCTTGAATCTGGGGAAATAGGAAGGAACGCGTTCAAGCCGAAAGACAACAGTGATACAGAGTTAAAAGCTGACAAGTTCTCTCCAGTATCGACCACAAAACCAACTGTATCTGTTAGCATGGGTTTGAACTCAGATTCAGACAGGATATCCAATGATCAACAGGATCAAAAGCCTGTGTGTTCAGCAGAATATGCATCTACACCAATCTCTGAAAATACTTCAGCTCAGTGCGTGATGGGAACAAAATCGACCACCTTAGGCTCGGATCAGATAGAAGGGAAGGCTAGTGAAGAAGATTCTCAAGCAAAGCAACTTCCCCAAAATGAACAAATGGAAAATGAAAAATCTCAAAAGCGACAAAGGCGTAAAAAGGAGATCAATCTTCCTCGCCGTTCCTCAAAGCGCCTTGCTGGAATTCAGCTTGATCCAGTTCCAGAACTTGTAACAAGAAGCCGAGCACGCCGAGCTGCAGTTAAACAATCAGGCCAGGGAGAAACCATCAGAAATGAGGATAAATCCTCTAACAGCTTGCCTAATGCCGCAGCGAAAAGGATGAATGTGACTGATGGTGGATCAGAAACAAAGTGCAAGTCTGAGAGTGCAGCAAACATGCTACAGTCAACTAAGTTCTCTACTCCAGAAAGGCTTCCCAACAAGACTACAGAAGAGGATGGAAGCAACAAGGATCAAGAATGCTTCTCATTTTGGCCTCAAGAGAACAATGCTACTATGAAAGATCCTGTGCTTGATTACTCCCATGAGTTTCCTCTTAAAGAACTGCTACAGGACCCATGCATTGCATTTGCAATACAAACTCTCACCGGCGAAACATTCGAAATGCAAGTATCCGGCGAATCAAGTGAGCATTCTGAAGCTCTTACTGCAAATATGGGTGGTGATGACAAGGGAGGGTGCAATGTGTTCTCACATCCAGAAAACTATGCTATTATACCGCAACAACATGCCGGTGCAGCCGAAACAGCAATCAAGACTAATGAAAACCAAACAGGATCATCATCTTCTGAAAAGGAACTTGATGTTTCATGGATGGATCCATGCATTGAATTTGCAATCAAAACTCTCACTGGCTCCATCCCATTAGATTCAGAGCAGAATCCCAAGAACTGCATTCAACAGCAGCTTAGCTCATCAAACACAAATCCCGGTGACATGGCCTATAAACAGGAACCAATGTTTAAAGAGTCTTTTGTGGATCCAGCAGCATCATCAACACACAAGAAATGTTGA 1392 0.4389 MEDPSSGDCLPQGWTVEVKVRKNGRRDKYYIDPASGYVFRSLRDVDRYLESGEIGRNAFKPKDNSDTELKADKFSPVSTTKPTVSVSMGLNSDSDRISNDQQDQKPVCSAEYASTPISENTSAQCVMGTKSTTLGSDQIEGKASEEDSQAKQLPQNEQMENEKSQKRQRRKKEINLPRRSSKRLAGIQLDPVPELVTRSRARRAAVKQSGQGETIRNEDKSSNSLPNAAAKRMNVTDGGSETKCKSESAANMLQSTKFSTPERLPNKTTEEDGSNKDQECFSFWPQENNATMKDPVLDYSHEFPLKELLQDPCIAFAIQTLTGETFEMQVSGESSEHSEALTANMGGDDKGGCNVFSHPENYAIIPQQHAGAAETAIKTNENQTGSSSSEKELDVSWMDPCIEFAIKTLTGSIPLDSEQNPKNCIQQQLSSSNTNPGDMAYKQEPMFKESFVDPAASSTHKKC* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3509 463 MobiDBLite consensus disorder prediction 239 263 - -
Ahy15g3509 463 PANTHER OS04G0193200 PROTEIN 8 449 IPR038945 -
Ahy15g3509 463 MobiDBLite consensus disorder prediction 71 114 - -
Ahy15g3509 463 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13 8 449 - -
Ahy15g3509 463 SUPERFAMILY DNA-binding domain 9 54 IPR016177 GO:0003677
Ahy15g3509 463 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1 74 IPR001739 GO:0003677
Ahy15g3509 463 MobiDBLite consensus disorder prediction 54 70 - -
Ahy15g3509 463 Coils Coil 156 176 - -
Ahy15g3509 463 MobiDBLite consensus disorder prediction 54 114 - -
Ahy15g3509 463 MobiDBLite consensus disorder prediction 210 230 - -
Ahy15g3509 463 Pfam Methyl-CpG binding domain 9 53 IPR001739 GO:0003677
Ahy15g3509 463 Gene3D - 1 107 - -
Ahy15g3509 463 MobiDBLite consensus disorder prediction 132 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3509 Ahy-Chr15 157839339 157843603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3509 - - aip:107619103 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3509 15 157839339 157843603 Ahy15g3509 15 157839339 157843603 ECH
Ahy15g3509 15 157839339 157843603 Ahy5g3098 5 112672955 112677262 hybridization