Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3032 ATGGCAATGGAGTGCATAACAAGTACTCAATCCATGACTCAACCACACCAAAACAACAACAAAGAAAGTGAGACAACACCATTGGTGTTTGATGCCTCAATCTTGAGGCATCAACACCAAATCCCAAGCCAATTCATTTGGCCTGACGAGGAGAAGCCAAGCTTGCAAGTATCCAAGCTTGTCATCCCCCTCATCGATCTAGGCGGCTTCTTGTCTGGCGACCCGGCCGCCACAATGGAAGCCGTCAGGCTCGTTGGGGAGGCATGCAAGAAGCATGGCTTCTTCCTCGTCGTCAACCACGGGATCAACGCCGACTTGATCTCTAATGCACATAGCTACATGGATGATTTCTTTGAGCTTCCCCTGTCTGAGAAACAGAGAGCTCAGAGGAAAACAGGGGAACACTGCGGCTATGCTAGTAGCTTCACTGGCAGATTCTCATCAAAGCTTCCATGGAAGGAGACACTCTCTTTTCAATTCTCCGCAGAGAAAAACTCACCAAAGATTGTCAAGGAATACTTATCCAACACAATGGGCAAAGAATTCGAACAATTCGGGTCAATATACCAAGATTACTGTGAAGCTATGAGCAAACTTTCACTGGGGATAATGGAGCTTCTTGGAATGAGCCTTGGAGTTGGAAAAGAATGCTTCCGGGAATTCTTTGAAGAGAATAGGTCAATAATGAGGTTGAACTATTATCCACCATGTCAAAAACCAGACCAAACATTAGGAACTGGACCTCATTGTGATCCAACATCTTTAACCATTCTTCACCAAGACCAAGTTGGTGGCTTGCAAGTGTTTGTTGATAACGAGTGGCATTCCATTACCCCAAATTTCAATGCTTTTGTCGTCAATATCGGAGACACCTTCATGGCGCTTTCAAATGGAAAATACAAGAGTTGTTTGCATAGAGCAGTGGTGAACAACAAGACAACAAGGAAATCACTTGCTTTCTTTTTGTGTCCAAGAAACGATAAGGTGGTGAGTCCACCAAGAGAATTAGTGGATGATGATTTTAGTCCAAGGGTGTACCCTGATTTTACATGGCCTATGCTCCTTGAGTTCACTCAAAAGTACTATAGAGCTGACATGAACACCCTTAATGCCTTTACCGATTGGATTCAACAAAAAGAAAGTTGCTGA 1149 0.4404 MAMECITSTQSMTQPHQNNNKESETTPLVFDASILRHQHQIPSQFIWPDEEKPSLQVSKLVIPLIDLGGFLSGDPAATMEAVRLVGEACKKHGFFLVVNHGINADLISNAHSYMDDFFELPLSEKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQFSAEKNSPKIVKEYLSNTMGKEFEQFGSIYQDYCEAMSKLSLGIMELLGMSLGVGKECFREFFEENRSIMRLNYYPPCQKPDQTLGTGPHCDPTSLTILHQDQVGGLQVFVDNEWHSITPNFNAFVVNIGDTFMALSNGKYKSCLHRAVVNNKTTRKSLAFFLCPRNDKVVSPPRELVDDDFSPRVYPDFTWPMLLEFTQKYYRADMNTLNAFTDWIQQKESC* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3032 382 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 18 378 - -
Ahy5g3032 382 Pfam 2OG-Fe(II) oxygenase superfamily 227 324 IPR044861 -
Ahy5g3032 382 Gene3D - 33 362 IPR027443 -
Ahy5g3032 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 225 324 IPR005123 -
Ahy5g3032 382 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 18 378 - -
Ahy5g3032 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 171 IPR026992 -
Ahy5g3032 382 MobiDBLite consensus disorder prediction 1 23 - -
Ahy5g3032 382 PRINTS Isopenicillin N synthase signature 249 270 - -
Ahy5g3032 382 PRINTS Isopenicillin N synthase signature 85 102 - -
Ahy5g3032 382 PRINTS Isopenicillin N synthase signature 284 310 - -
Ahy5g3032 382 SUPERFAMILY Clavaminate synthase-like 34 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3032 Ahy-Chr5 111807504 111809623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3032 40 375 Glycosyltransferase AT5G59530 28.696 7.31e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3032 K05282 - gmx:100305378 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3436 15 156853202 156855372 Ahy5g3032 5 111807504 111809623 hybridization
Ahy5g3032 5 111807504 111809623 Ahy19g3511 19 157819106 157820977 PCT
Ahy5g3032 5 111807504 111809623 Ahy9g2118 9 109934556 109936402 PCT
Ahy19g3511 19 157819106 157820977 Ahy5g3032 5 111807504 111809623 PCT
Ahy9g2118 9 109934556 109936402 Ahy5g3032 5 111807504 111809623 PCT