Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3511 ATGGTTAATGCAATGGCAATAGACTGCATGCACTCCATGCCTCAACCACCAAAAGAATCCTCATTGGTGTTTGAAGCCTCCGTTTTCAGCCACCAACTCAACCTACCGTCACAATTCATTTGGCCTGACCACGAGAAAGCCTCCATCCATGTCCCTGAGCTTCAGGTCCCATTCATTGATCTCGGAGGGTTCCTTTCCGGCGATCCCCTCGCCGCAATGGAAGCCTCAAGCCTTGTTGGCGAAGCATGCCGGAAGCACGGCTTCTTCCTTGTCGTCAACCACGGCATAGACAGGAACTTGATCACCGATGCTCACGCTTTGATGGATGATTTCTTTGAGCTTCCCCTGTCCCAGAAACAGAGAGCTCAGAGGAAAACAGGGGAGCACTGTGGTTATGCTAGTAGCTTCACCGGTAGATTTTCTTCTAAGCTTCCATGGAAGGAGACACTTTCCTTTCAATACTCGGCAGATAAAAAACACTCACCCAACCTTGTCAAGGACTACCTTTGCAGTAAACTGGGCAAAGAGTTTGAGCAATTCGGGAATGTGTATGAGAAGTACTGTGAGGCAATGAGCAATCTTTCTTTGGGGATAATGGAGCTTCTAGGGATGAGCCTTGGAGTTGGCAAATCGTATTTTAGAGAGTTCTTTGAAGAGAACAATTCAATAATGAGGCTCAATTACTACCCTCCTTGTCAAAAACCTGACCTCGCCTTGGGAACTGGACCTCATTGTGATCCAACATCCTTAACCATTCTCCACCAGGACCAAGTTGGTGGCCTCCAAGTTTATGTTGACGATCAGTGGCACTCAGTTACCCCGAATTTCAATGCTTTTGTCGTCAATATTGGTGATACCTTCATGGCTCTTTCAAATGGGAGATACAAGAGTTGTTTGCACAGGGCAGTGGTAAATAGCAAGACAACAAGAAAATCACTTGCTTTCTTCTTGTGTCCAAGAAGTGACAAGGTTGTGACGCCACCATGTGAGTTAGTGGACAATTTGAGCTCAAGGCTCTACCCTGATTTTACATGGTCCATGCTCCTTGAGTTTACTCAGAAGCACTACAGAGCTGACATCAGAACCCTTGATGAATTCACCAACTGGCTTCAACGGAAGGACGATAAGATTATTTGA 1137 0.4626 MVNAMAIDCMHSMPQPPKESSLVFEASVFSHQLNLPSQFIWPDHEKASIHVPELQVPFIDLGGFLSGDPLAAMEASSLVGEACRKHGFFLVVNHGIDRNLITDAHALMDDFFELPLSQKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQYSADKKHSPNLVKDYLCSKLGKEFEQFGNVYEKYCEAMSNLSLGIMELLGMSLGVGKSYFREFFEENNSIMRLNYYPPCQKPDLALGTGPHCDPTSLTILHQDQVGGLQVYVDDQWHSVTPNFNAFVVNIGDTFMALSNGRYKSCLHRAVVNSKTTRKSLAFFLCPRSDKVVTPPCELVDNLSSRLYPDFTWSMLLEFTQKHYRADIRTLDEFTNWLQRKDDKII* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3511 378 SUPERFAMILY Clavaminate synthase-like 25 359 - -
Ahy19g3511 378 PANTHER GIBBERELLIN 20-OXIDASE 16 371 - -
Ahy19g3511 378 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 160 IPR026992 -
Ahy19g3511 378 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 371 - -
Ahy19g3511 378 Pfam 2OG-Fe(II) oxygenase superfamily 221 319 IPR044861 -
Ahy19g3511 378 Gene3D - 26 357 IPR027443 -
Ahy19g3511 378 PRINTS Isopenicillin N synthase signature 244 265 - -
Ahy19g3511 378 PRINTS Isopenicillin N synthase signature 79 96 - -
Ahy19g3511 378 PRINTS Isopenicillin N synthase signature 279 305 - -
Ahy19g3511 378 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 219 319 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3511 Ahy-Chr19 157819106 157820977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3511 38 369 Glycosyltransferase AT5G59530 27.193 4.23e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3511 K05282 - gmx:100816992 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3511 19 157819106 157820977 Ahy19g3511 19 157819106 157820977 ECH
Ahy19g3511 19 157819106 157820977 Ahy9g2118 9 109934556 109936402 hybridization
Ahy15g3436 15 156853202 156855372 Ahy19g3511 19 157819106 157820977 PCT
Ahy5g3032 5 111807504 111809623 Ahy19g3511 19 157819106 157820977 PCT
Ahy19g3511 19 157819106 157820977 Ahy15g3436 15 156853202 156855372 PCT
Ahy19g3511 19 157819106 157820977 Ahy5g3032 5 111807504 111809623 PCT