Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2593 ATGTCCATCGACCTCAAACTCTCGCGCTTCGATCGTATTTATCGCCCTTCGGAAGCACTGGAAGGCAAAATCATCATCAAAACGCAGTCTTCAATTTCCCACTATGGAATTCGCCTTACTTTCAAAGGATCCGTCAACATGCAGGTTCGTGGAGGATCAGCTGGTGTTGTTGAGTCACTCTATGGAGTTATTAAGCCAATCCCTATTTTGAATAGGACCACCGAGGTTAAACCTTCTGGAAAGATTGCTTCGGGCACAACAGAGATACCATTTTCGGTGACCCTTAGACAGCAAGGTGAAAATTTGGAAAAGTTTTATGAGACTTTCCATGGGGCAAATATAAGTATCCAGTATTTGGTGACTGTAGATGTGACTCGCGGATACTTACATAAATCTTTATCAACAACAATGGAGTTCATTGTTGAAAGTGATAAAGCTGATCTTCTACAACGGCCAATTCCTCCAGAAATGGTCATCTTCTACATAACCCAGGACACTCAACGACACTCTCTACTTCCTGAATTAAAATCTGGTGGATTTCGGGTGATGGGGAAGATCTCTTCTCAGTGTTCTTTGGCTGGTCCTATTAGTGGTGAGTTAATTGTAGAAACATCTGCAGTTCCGATTCACTCAATCGACATTCAATTGTTTCGTGTTGAGTCCATTCTTCTTGGGGAGAAAATTGCAATTGAAACATCTTTGATACAAACGACCCAGATAGCAGATGGAAATGTATGCCATAATTTGACTATACCTATCTATGTAATACTTCCGCGGCTTCTGACGTGTCCAACAACTTTTGCTGGTCCTTTCTCAATTGAGTTCAAAGTTGCCATTGTCATAAGTTTTCAGTCAGAGCTATCTCAACTGCATAAGAAGACTGACTCCAGAACTCCAGAACTTTGGCTAGCAATGGAAACATTGCCGCTCGAGTTGGTTCGGACAAAGTAA 951 0.4185 MSIDLKLSRFDRIYRPSEALEGKIIIKTQSSISHYGIRLTFKGSVNMQVRGGSAGVVESLYGVIKPIPILNRTTEVKPSGKIASGTTEIPFSVTLRQQGENLEKFYETFHGANISIQYLVTVDVTRGYLHKSLSTTMEFIVESDKADLLQRPIPPEMVIFYITQDTQRHSLLPELKSGGFRVMGKISSQCSLAGPISGELIVETSAVPIHSIDIQLFRVESILLGEKIAIETSLIQTTQIADGNVCHNLTIPIYVILPRLLTCPTTFAGPFSIEFKVAIVISFQSELSQLHKKTDSRTPELWLAMETLPLELVRTK* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2593 316 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 3 314 IPR028934 GO:0006886
Ahy5g2593 316 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 26C 3 314 - -
Ahy5g2593 316 Pfam Vacuolar protein sorting-associated protein 26 12 281 IPR028934 GO:0006886
Ahy5g2593 316 Gene3D - 184 293 IPR014752 -
Ahy5g2593 316 Gene3D - 3 144 IPR014752 -
Ahy5g2593 316 SUPERFAMILY E set domains 5 173 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2593 Ahy-Chr5 102019867 102024462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2593 K25730 - gmx:100820593 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2625 15 141850374 141854971 Ahy5g2593 5 102019867 102024462 hybridization