Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2625 ATGAAGTGGAGTGTTGCCTTCTCAAAACTCATAACTCATCTGAGCCACAGAGCCGGTGACCAGTGCTTGTTTGTTTTTGTTAGTTGCGATGTCTATCGACCTCAAACTCTCGCGCTTCAATCGTATTTATCGCCCTTCGGCAAAATCATCATTAAAACGCAGTCTTCAATTTCCCACTATGGAATTCGCCTTACTCTCAAAGGATCCGTCAACATGCAGGTTCGTGGAGGATCAGCTGGGGTTGTTGAGTCACTCTATGGAGTTATTAAGCCAATCCCTATTTTGAATAGGACCATCGAGGTTAAACCTTCTGGAAAGATTGCTTCGGGCACAACAGAGATACCATTTTCAGTGACCCTTAGACAGCAAGGTGAAAATTTGGAAAAGTTTTATGAGACTTTCCATGGGGCAAATATAAGTATCCAGTATTTGGTGACTGTAGATGTGACTCGCGGATACTTACATAAATCTTTGTCAACAACAATGGAGTTCATTGTTGAAAGTGATAAAGCTGATCTTCTACAACGGCCAATTCCTCCAGAAATGGTCATCTTCTACATAACCCAGGACACTCAACGACACTCTCTACTTCCTGAATTAAAATCTGGTGGATTTCGGGTGATGGGGAAGATCTCTTCTCAGTGTTCTTTGGCTGGTCCTATTAGTGGTGAGTTAACTGTAGAAACATCTGCAGTTCCGATTCACTCAATCGACATTCAGTTGTTTCGTGTTGAGTCCATTCTTCTTGGGGAGAAAATTGCAACTGAAACATCTTTGATACAAACGACCCAGATAGCAGATGGAGATGTATGCCATAATTTGACTATGCCTATCTATGTAATACTTCCACGGCTTCTGACGTGTCCAACAACTTTTGCTGGTCCCTTCTCAATTGAGTTCAAAGTTGCCATTGTCATAAGTTTTCAGTCAGACCTATCTCAAGTGCATAAGAAGACTGACTCCAGAACTCCAAAACTTTGGCTAGCAATGGAAACATTGCCGCTCGAGTTGGTCCGGACAAAGTAA 1026 0.423 MKWSVAFSKLITHLSHRAGDQCLFVFVSCDVYRPQTLALQSYLSPFGKIIIKTQSSISHYGIRLTLKGSVNMQVRGGSAGVVESLYGVIKPIPILNRTIEVKPSGKIASGTTEIPFSVTLRQQGENLEKFYETFHGANISIQYLVTVDVTRGYLHKSLSTTMEFIVESDKADLLQRPIPPEMVIFYITQDTQRHSLLPELKSGGFRVMGKISSQCSLAGPISGELTVETSAVPIHSIDIQLFRVESILLGEKIATETSLIQTTQIADGDVCHNLTMPIYVILPRLLTCPTTFAGPFSIEFKVAIVISFQSDLSQVHKKTDSRTPKLWLAMETLPLELVRTK* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2625 341 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 47 339 IPR028934 GO:0006886
Ahy15g2625 341 Pfam Vacuolar protein sorting-associated protein 26 47 307 IPR028934 GO:0006886
Ahy15g2625 341 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 26C 47 339 - -
Ahy15g2625 341 Gene3D - 209 319 IPR014752 -
Ahy15g2625 341 Gene3D - 46 169 IPR014752 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2625 Ahy-Chr15 141850374 141854971 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2625 K25730 - gmx:100820593 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2625 15 141850374 141854971 Ahy15g2625 15 141850374 141854971 ECH
Ahy15g2625 15 141850374 141854971 Ahy5g2593 5 102019867 102024462 hybridization