Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2472 ATGCCACCATGTTCTAAAGAAGAAGCTCTTGTTAGACTCTTCTACAATGTCTCAAGCTCTTTTCAGCTTCTCTTCATCTTTCTCTTCTCTTCTTCTATTTTGCTTCTCAACTTCATCAACTTCATTGGTAGCTACTCCATTTTCCAAAGGGATCAGCAGTATGAATATGTGTCTTCTGAGTATGATGAAGATGAAGAGATTCAAGAAAGTTATAATAATAATAATAATAATGATGATGATGAGGATTATTCTATGGAGAGAGATCATATAGTAGCAGATATCATTGGTGGAGGAGAAACCCTTTTGTTTCTTAAACATAATCAGAATATCTCTCATGAAGAATTCATCACCCCCCAAGAGAGCTTCATTGAAGAAGATGATTCAGAAGAAACCTTTTCAGTTCACAAGTCACCAGTGGTTTCAGATTTTGGAAGTGAGGAACCAGAAGTAGTAGTAGAAACTGAAGAGGAAGAAGAAGAAAAAGAATTGTTTCCAGCAAGAGATGCTGATTCTGTTCCAGATTCTGTCCCAGTTGAGATAGTGACAAAAAGTGACATATTGGATAGAGACAAAAACTGTGATGATGATGAAGTTGGTGTTGGACTTGTCAAGAATAAGAAGGTGCAAGATTCAAACAAGATCACAAGGGATGATGATGAGAGATTCTTCTATGTGCATGCTGGTCCTACTATTACACAGTTGGACAGTACTAATAATAAGAAACTTATTAGTGAGGAAAAGGATCATAATAATAATAATAAATATGATGAGGAAATATTTGGAGATTCTTGCACTGTAGGCTCCACTTCTAAGAGCTCCTCTGAATGGAGGAGTTCCATGAAAGATTCTTGTTGTGGAACTGAAGACCCTTTTTCTTCATCATCAAGGAGAAGCTGCCCCAAGTGGGAATCTTACACTCTCTTTCAAAAATATGATGAGGAAATGTCATTCCTTCACAGGATTAGTGCACAGAAACTTCAAGAAACTGAGTCTTTAAGATCTATTAAGGTGGCTCCAAGGTCAATTTCAGAGAGAATTGTGTACAAGTTTTCAACTGCAAATAAGAAACTAGAAGGTGATAATAATATCCACCATAACCCATACAACGAACTAGAAGCAGCATATGTGGCACAAATCTGCATAACTTGGGAAGCACTTAATTGGAACTACAAGAAGTTTCAGTCAAAAAGAGCTTCAAGGGTTGACCTTGCTGATCCTGGTTGTCCAGCCACCATTGCACAGCAGTTCCAACAGTTTCAAGTTTTGTTACAGAGATATGTTGAGAATGAGCCTTATGAACATGGAAGGAGGCCTGAGATTTATGCTAGAGTCAGGCTCATGGCTCCTAAATTGCTTCTAGTGCCCGAATATCGAGAATCAGATGATGATGAGAAGGAAGATGGCTTAGACACAAGAATATCTTCAGCTTCATTTCTTGTGATAATGGAAGATGGGATCAAAACATTCATGAGTTTCCTCAAAGCTGATAAAGAAAGACCATGTCAGATTCTAGCATCCTACTTTAGGAGAAACAAAAGAGCCTTGGTTGATCCAACACTACTCCGCCTTATCAAGAAAGTTAACCATAAAAAGAAGATTAAGGTTAAGGACCTTCGGCGTTCCGGCAAGTGTTTGAGGAGGAAGAAGCTGAAAGTGGAAGAAGAGATGGAGATTGTAATGGCTCTGATAGACCTGAAAGTGGTGTCAAGGGTGTTGAGAATGAGTGAGTTGAGTGAAGAACAGTTGCATTGGTGTGAAGAAAAGATGAGCAAAGTGAAGGTCATGGATGGCAAGCTCCAAAGAGATTCCACCCCACTTTTCTTCCCTCCTTCTTCTTCACATTGA 1845 0.3875 MPPCSKEEALVRLFYNVSSSFQLLFIFLFSSSILLLNFINFIGSYSIFQRDQQYEYVSSEYDEDEEIQESYNNNNNNDDDEDYSMERDHIVADIIGGGETLLFLKHNQNISHEEFITPQESFIEEDDSEETFSVHKSPVVSDFGSEEPEVVVETEEEEEEKELFPARDADSVPDSVPVEIVTKSDILDRDKNCDDDEVGVGLVKNKKVQDSNKITRDDDERFFYVHAGPTITQLDSTNNKKLISEEKDHNNNNKYDEEIFGDSCTVGSTSKSSSEWRSSMKDSCCGTEDPFSSSSRRSCPKWESYTLFQKYDEEMSFLHRISAQKLQETESLRSIKVAPRSISERIVYKFSTANKKLEGDNNIHHNPYNELEAAYVAQICITWEALNWNYKKFQSKRASRVDLADPGCPATIAQQFQQFQVLLQRYVENEPYEHGRRPEIYARVRLMAPKLLLVPEYRESDDDEKEDGLDTRISSASFLVIMEDGIKTFMSFLKADKERPCQILASYFRRNKRALVDPTLLRLIKKVNHKKKIKVKDLRRSGKCLRRKKLKVEEEMEIVMALIDLKVVSRVLRMSELSEEQLHWCEEKMSKVKVMDGKLQRDSTPLFFPPSSSH* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2472 614 Pfam Protein of unknown function (DUF1666) 370 609 IPR012870 -
Ahy5g2472 614 PANTHER DNA LIGASE (DUF1666)-RELATED 3 609 - -
Ahy5g2472 614 MobiDBLite consensus disorder prediction 61 79 - -
Ahy5g2472 614 PANTHER DUF1666 FAMILY PROTEIN 3 609 - -
Ahy5g2472 614 MobiDBLite consensus disorder prediction 61 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2472 Ahy-Chr5 99539418 99543486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2472 - - gsj:114425724 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2793 15 145566588 145569889 Ahy5g2472 5 99539418 99543486 hybridization
Ahy13g2103 13 39002545 39005344 Ahy5g2472 5 99539418 99543486 PCT
Ahy3g1809 3 37163362 37166342 Ahy5g2472 5 99539418 99543486 PCT
Ahy5g2472 5 99539418 99543486 Ahy13g2103 13 39002545 39005344 PCT
Ahy5g2472 5 99539418 99543486 Ahy3g1809 3 37163362 37166342 PCT