Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1809 ATGACATGTTCCAAAGAAGTTGTTCTTAGAGTCTTCAATTATGCCTCAGGCTATTTCCATCTTCTCCTCAATCATGTCTCAACCTCTTTTCAGCTTCTCTTCCTCTTCCTCTTCTCCCTCGCTATTTTTCTCCTCACCTTCTCAACCTTCACTGGCAGATTCCCCTTAATCCAAAGAGATCAGCAATATGAATATGTGTTTTCTGAAGACGACGAAGAAGAAGAAGAAGAAGCGCAACAAGGATATGGTCACCATGCTGAGAAGGTGAGAGATCATGTAGCAGCATCATCTGCAGACTCAATCCATGGCAGGGAAACCCTTTTGTTTGAGGAGCCTCAGAAAAAGCAGCATTGTTCTTATTCTGAAGAGTTTGCAACCCCCCGAGAGAGCTTGAATGAGGAAGACTCAGAATTTATAGGAAGAAATGCTGATTCTGTTTCAAACTCTGTCTCATTTGCAAGCAGACCAACCTCTACTATCACCATGAACACATATAAATGTAACAAAAACTCCCAAGCAGATGAACGTGTTTGTGTTGGAAGAACAACAAAGAATAAGAAGGTGCAGGAGGCAAAGCTCACCAGGGATGATAGGTTCTTTATTTTTGATCCAACCCATCAGTTCCAAAATAAGAAGCTGACTGTTGAAGATAAGCATCATGATGATGATGATGATGATGGTGATTCGTGCATTGATGGTTCTAGTTCTACACCTAGGGTCTCCTCTGAATGGAGGAGCTCCATTCATTTCAAGGATTCTGAGACAGAAGAAGCATTGTCTTCATCATCTAGAAGAAGTTGCCCCAAGTGGGAATCATATACTTTGTTCCAAAAATATGATGAAGAAATGTCCCTCTTAGACAGAATTAGTGCACAGAAACTTGAGGAAACAGAGTATTTAAGATCCATGGAAGCCTCTCCAAGATCAATTTCAGAGCGTATTGCATCAAGTGTGAAGAAGAAAGCAGGTGATATAGGTCACAATAACCCATATGGGGAACTAGAGGCCGCTTATGTTGCACAGATTTGCTTAACATGGGAAGCTCTTAATTGGAACTACAAAAACTTTGAATCAAAACACGGCTGGCGCCACGAGGCTGATAGCGGTTGTCCTGCCAGCACAGCACAGCAATTCCAGCAATTTCAGGTATTGCTGCAGAGATACATTGAGAATGAGCCCTATGAACATGGCAGAAGACCTGAGATTTATGCTAGGATGAGGCTCTTGGCACCAAAATTGCTTCTAGTCCCACAATGTCCAGATTGGGAGAATGATGAAAAGCATGGGAGTATGGAGAGTAGAATATCATCAGCGTCATTCCTGAAGATAATGGAGGATGGGATCCGAACATTCATGAAGTTTCTAAAGGCTGACAAAGAGAAACCATGTCAGATGGTGGCCGCTTACTTTTGGAGAAATCGGAGAATCACGGTTGATCCAACACTCCTCCGCCTAATCAAGAAAGTTAATCAAAAGAAGAGGAAGAAGGTGAAGGATGTTGGGTTGAGGAAGAGAAAGCTTAGAAAGGGTGAAGAAGAAGAGATGGATGTGTTAATGGCAATGATAGACTTGAAGGTGGTGTCGAGGGTGCTGAGAATGAAGGAGTTGAGCGAAGCGCAGTTGCATTGGTGTGAACACAAGATGAGCAAAGTTAGAATCGTCGCAGGGAAGCTTCAAACAGATTATTCCACTCCACTTTTCTTCCCTTCAATCTAA 1716 0.4254 MTCSKEVVLRVFNYASGYFHLLLNHVSTSFQLLFLFLFSLAIFLLTFSTFTGRFPLIQRDQQYEYVFSEDDEEEEEEAQQGYGHHAEKVRDHVAASSADSIHGRETLLFEEPQKKQHCSYSEEFATPRESLNEEDSEFIGRNADSVSNSVSFASRPTSTITMNTYKCNKNSQADERVCVGRTTKNKKVQEAKLTRDDRFFIFDPTHQFQNKKLTVEDKHHDDDDDDGDSCIDGSSSTPRVSSEWRSSIHFKDSETEEALSSSSRRSCPKWESYTLFQKYDEEMSLLDRISAQKLEETEYLRSMEASPRSISERIASSVKKKAGDIGHNNPYGELEAAYVAQICLTWEALNWNYKNFESKHGWRHEADSGCPASTAQQFQQFQVLLQRYIENEPYEHGRRPEIYARMRLLAPKLLLVPQCPDWENDEKHGSMESRISSASFLKIMEDGIRTFMKFLKADKEKPCQMVAAYFWRNRRITVDPTLLRLIKKVNQKKRKKVKDVGLRKRKLRKGEEEEMDVLMAMIDLKVVSRVLRMKELSEAQLHWCEHKMSKVRIVAGKLQTDYSTPLFFPSI* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1809 571 MobiDBLite consensus disorder prediction 213 247 - -
Ahy3g1809 571 Pfam Protein of unknown function (DUF1666) 333 569 IPR012870 -
Ahy3g1809 571 PANTHER DUF1666 FAMILY PROTEIN 134 570 - -
Ahy3g1809 571 PANTHER DNA LIGASE (DUF1666)-RELATED 134 570 - -
Ahy3g1809 571 PANTHER DUF1666 FAMILY PROTEIN 22 140 - -
Ahy3g1809 571 PANTHER DNA LIGASE (DUF1666)-RELATED 22 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1809 Ahy-Chr3 37163362 37166342 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1809 - - gmx:100776190 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2103 13 39002545 39005344 Ahy3g1809 3 37163362 37166342 hybridization
Ahy3g1809 3 37163362 37166342 Ahy15g2793 15 145566588 145569889 PCT
Ahy3g1809 3 37163362 37166342 Ahy5g2472 5 99539418 99543486 PCT
Ahy15g2793 15 145566588 145569889 Ahy3g1809 3 37163362 37166342 PCT
Ahy5g2472 5 99539418 99543486 Ahy3g1809 3 37163362 37166342 PCT