Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2456 ATGGCTACACAGAAATATTGTCCTCTTGTCTCTATTTTCTGCCACATTATTTTCTTGCTCCTGATTTCCCATCCACCCACCACACTTTCCCAAGATCCAAGCTCTTCTAACCCGACCATAGCACAATGCACATCAACCCTCCTTCCTCTCATCCCTTGCGCACCGTTCGTGCAGGGTACTTCTAAGTCTCCTGTGCAAGCATGCTGCGGCAACCTCAGGCAACTCTACAGCCAAGAGCCTCACTGTCTCTGCCTTCTGCTAAATGACACTACCATGAGCTCTTTCCCCATTAACAGGACGCTTGCTCTAGAGCTGCCGGCACTTTGTGCCCTTCAAGTTGACATCACCTGCCCAGGGGAACAACTCCAAGTGCCTGTTCCTGCAACTTCGCCGGCTTCTCCAATGTCCTTCAGGGCAAAGAACAGCTCTAATGTTGCTGCTTCTCCTGCAGTTTTAGTTGCACCAAGATCAAGTATGATGGGATTCCAATTTGGAAGTAGCCAGAGCACGAGCTTAAAGGCAAATAACAGAGTGGCGGCAGGGCTGGTGACTTTGTCAATTCTATTGCTCACAGCATTTCAAGGAGTGTTAGAGCTGATGACTTTAGCAATGTTGTTACTACTAATTAAAATTAAGATTGAAATAATGTATTTAATTCATGTAGGATTCACTTGA 675 0.4637 MATQKYCPLVSIFCHIIFLLLISHPPTTLSQDPSSSNPTIAQCTSTLLPLIPCAPFVQGTSKSPVQACCGNLRQLYSQEPHCLCLLLNDTTMSSFPINRTLALELPALCALQVDITCPGEQLQVPVPATSPASPMSFRAKNSSNVAASPAVLVAPRSSMMGFQFGSSQSTSLKANNRVAAGLVTLSILLLTAFQGVLELMTLAMLLLLIKIKIEIMYLIHVGFT* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2456 224 Pfam Probable lipid transfer 34 116 IPR016140 -
Ahy5g2456 224 Gene3D - 39 117 IPR036312 -
Ahy5g2456 224 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 18 159 - -
Ahy5g2456 224 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 18 159 IPR043325 -
Ahy5g2456 224 SMART aai_6 43 117 IPR016140 -
Ahy5g2456 224 CDD AAI_LTSS 50 109 - -
Ahy5g2456 224 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 42 116 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2456 Ahy-Chr5 99061274 99062697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2456 41 171 Acyl Lipid Metabolism Gene Families AT1G73890 47.222 2.74e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2456 - - gsj:114418601 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2815 15 146116674 146118083 Ahy5g2456 5 99061274 99062697 hybridization