Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2815 ATGGCTACACAGAAATATTGTCCTCTTGTCTCTATTTTCTGTCACATTATTTTCTTGCTCCTGATTTCCCATCCACCCACCACACTTTCCCAAGATCCGAGCTCTTCTAACCCGACCATAGCGCAATGCACATCAACCCTCCTTCCTCTCATCCCTTGCGCACCGTTCGTGCAGGGTACTTCTAAGTCTCCTGTGCAAGCATGCTGCGGCAACCTCAGGCAACTCTACAGCCAAGAGCCTCACTGTCTTTGCCTTCTGCTGAATGACACTACCATGAGCTCTTTCCCCATTAACAAGACACTTGCTCTGCAGCTGCCGGCACTTTGTGCCCTTCAAGTTGACATCTCCACCTGCCCAGGGGAACAACTCCAAGTGCCTGTTCCTGCAACTTCGCCGGCTTCTCCAATGTCCTTCAGGGCAAAGAACAGCTCTAATGTTGCTGCTTCTCCTGCAGTTTTAGTTGCACCAAGATCAAGTATGATGGGATTCCAATTTGGAAGTAGCCAGAGCACCAGCTTAAAGGCAAATAACAGAGTGGCGGCAGGGCTGGTGACTTTGTCAATTCTATTGCTCACAGCATTTCAAGGAGTGTTAGAGCTGATGACTTTAGCAATGTTGTTACTACTAATTAAAATTAAGATTGAAATAATGTATTTAATTCATGTAGGATTCACTTGA 678 0.4646 MATQKYCPLVSIFCHIIFLLLISHPPTTLSQDPSSSNPTIAQCTSTLLPLIPCAPFVQGTSKSPVQACCGNLRQLYSQEPHCLCLLLNDTTMSSFPINKTLALQLPALCALQVDISTCPGEQLQVPVPATSPASPMSFRAKNSSNVAASPAVLVAPRSSMMGFQFGSSQSTSLKANNRVAAGLVTLSILLLTAFQGVLELMTLAMLLLLIKIKIEIMYLIHVGFT* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2815 225 Pfam Probable lipid transfer 34 118 IPR016140 -
Ahy15g2815 225 SMART aai_6 43 118 IPR016140 -
Ahy15g2815 225 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 18 160 - -
Ahy15g2815 225 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 18 160 IPR043325 -
Ahy15g2815 225 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 42 120 IPR036312 -
Ahy15g2815 225 Gene3D - 39 115 IPR036312 -
Ahy15g2815 225 CDD AAI_LTSS 50 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2815 Ahy-Chr15 146116674 146118083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2815 41 172 Acyl Lipid Metabolism Gene Families AT1G73890 48.611 5.29e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2815 - - gsj:114418601 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2815 15 146116674 146118083 Ahy15g2815 15 146116674 146118083 ECH
Ahy15g2815 15 146116674 146118083 Ahy5g2456 5 99061274 99062697 hybridization