Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1907 ATGAGGCTACAACAAATGAATGTGGGAGTGCTGCTATTGTTCTTGCTTCTTGTTCTTGCTAGCTTTCCATATAAAGTAAAAGGGTATCTGTATCCATTAACAGATCGTCCTATAAACCCCTTGGTTGATCTATGGACAGATCGTTTCCTTGATCCACTTCGTGTTCTTGAGCAAATCCCAGTTGAGCTTGGAAAAAATGATCCATCATCACCCATGGCAATGATGATGACACCTGCAAAGGTAGATTGGAAGGAGACACCAGAAGGGCATGTTATAGCCCTTGATGTTCCAGGGTTGAACAGAGATGAGATCAAGATTGAAGTGGAGGAAGGGAACAGGGTTCTGAGGGTAAGTGGAGAGAGGAAGAAAGAGGAGGAGAAGGAAGGGGAACACTGGCACAGGGTTGAAAGATCCTATGGCAAATTCTGGAGGCAGTTCAAGGTGCCTGAGAATGTGGACTTGGAATCTGTGAAGGCTAAGCTAGAGAATGGTGTGCTTACTCTGACACTGGAAAAATTGTCACCTGATAAGATCAAAGGTCCAAGAATGGTGAGCATTGCAGGGGAGAGTGAGAAACCAGCACAAATCAACGTCAATGAAACCAAACAGGAGCTATGA 618 0.4466 MRLQQMNVGVLLLFLLLVLASFPYKVKGYLYPLTDRPINPLVDLWTDRFLDPLRVLEQIPVELGKNDPSSPMAMMMTPAKVDWKETPEGHVIALDVPGLNRDEIKIEVEEGNRVLRVSGERKKEEEKEGEHWHRVERSYGKFWRQFKVPENVDLESVKAKLENGVLTLTLEKLSPDKIKGPRMVSIAGESEKPAQINVNETKQEL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1907 205 ProSiteProfiles CS domain profile. 76 184 IPR007052 -
Ahy5g1907 205 PANTHER 22.0 KDA HEAT SHOCK PROTEIN 16 195 - -
Ahy5g1907 205 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 16 195 - -
Ahy5g1907 205 Gene3D - 35 200 IPR008978 -
Ahy5g1907 205 CDD ACD_ScHsp26_like 80 172 - -
Ahy5g1907 205 Pfam Hsp20/alpha crystallin family 82 186 IPR002068 -
Ahy5g1907 205 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 70 189 IPR002068 -
Ahy5g1907 205 SUPERFAMILY HSP20-like chaperones 70 179 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1907 Ahy-Chr5 87321651 87322828 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1907 K13993 - gmx:547971 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3380 15 156305248 156306468 Ahy5g1907 5 87321651 87322828 hybridization
Ahy5g1907 5 87321651 87322828 Ahy19g1912 19 110613090 110613977 PCT
Ahy5g1907 5 87321651 87322828 Ahy9g1552 9 83866651 83867543 PCT
Ahy19g1912 19 110613090 110613977 Ahy5g1907 5 87321651 87322828 PCT
Ahy9g1552 9 83866651 83867543 Ahy5g1907 5 87321651 87322828 PCT