Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy19g1912 | ATGAGGCCACAAAAACTCAAGTTGCTGCTAGCATCATTGTTGTTGCTTATTGTTGCGCAATGTTGTTCCAACACAAAAGCTTCTCTCCTTCCTTTGATAGATCCTCCCACCTCTCTCTTATCTGACCTCTGGCCGGACCCGTTCCGAGTGCTGGAGCAAGTACCATTCGGGGTAGGCGGCAGGGACGAGCAAGCGGCGATGGCGCTCTCGCCGGCGAGAGTAGACTGGAAGGAGACTCCGGAGGGTCACGTGATCATGCTGGACGTGCCGGGGCTGAAGAGAGACGAGATTAAGATCGAGGTTGACGAAGGAAGGGTGCTGCGAGTGAGCGGAGAGCGCAAGAGGGAGGAAGAAAGGAAGGGAGATCACTGGCATAGGGTTGAGAGGTCATATGGAAAGTTCTGGAGGCAGTTTCGGATGCCGGAGAATGTTGACTTGGATTCTGTTAAGGCGAAGCTTGACAACGGTGTGCTTACTTTGATTCTTGATAAGTTGTCACCTGATAAGATCAAGGGTCCTAGGGTGGTTACCATTGCTCCTGGGGAGTCTGAGGGTGAGGGTCCCGCCAAACTCGACAACAGTGGCGCCAAGCGTCAAGAGCTTTGA | 606 | 0.533 | MRPQKLKLLLASLLLLIVAQCCSNTKASLLPLIDPPTSLLSDLWPDPFRVLEQVPFGVGGRDEQAAMALSPARVDWKETPEGHVIMLDVPGLKRDEIKIEVDEGRVLRVSGERKREEERKGDHWHRVERSYGKFWRQFRMPENVDLDSVKAKLDNGVLTLILDKLSPDKIKGPRVVTIAPGESEGEGPAKLDNSGAKRQEL* | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy19g1912 | 201 | Gene3D | - | 35 | 178 | IPR008978 | - | |
| Ahy19g1912 | 201 | SUPERFAMILY | HSP20-like chaperones | 62 | 175 | IPR008978 | - | |
| Ahy19g1912 | 201 | MobiDBLite | consensus disorder prediction | 177 | 201 | - | - | |
| Ahy19g1912 | 201 | CDD | ACD_ScHsp26_like | 73 | 164 | - | - | |
| Ahy19g1912 | 201 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 63 | 181 | IPR002068 | - | |
| Ahy19g1912 | 201 | PANTHER | 22.0 KDA HEAT SHOCK PROTEIN | 15 | 185 | - | - | |
| Ahy19g1912 | 201 | PANTHER | HEAT-SHOCK PROTEIN 20 FAMILY MEMBER | 15 | 185 | - | - | |
| Ahy19g1912 | 201 | Pfam | Hsp20/alpha crystallin family | 75 | 178 | IPR002068 | - | |
| Ahy19g1912 | 201 | ProSiteProfiles | CS domain profile. | 69 | 176 | IPR007052 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy19g1912 | Ahy-Chr19 | 110613090 | 110613977 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy19g1912 | K13993 | - | gmx:100500319 | 262.307 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy19g1912 | 19 | 110613090 | 110613977 | Ahy19g1912 | 19 | 110613090 | 110613977 | ECH | |
| Ahy19g1912 | 19 | 110613090 | 110613977 | Ahy9g1552 | 9 | 83866651 | 83867543 | hybridization | |
| Ahy15g3380 | 15 | 156305248 | 156306468 | Ahy19g1912 | 19 | 110613090 | 110613977 | PCT | |
| Ahy5g1907 | 5 | 87321651 | 87322828 | Ahy19g1912 | 19 | 110613090 | 110613977 | PCT | |
| Ahy19g1912 | 19 | 110613090 | 110613977 | Ahy15g3380 | 15 | 156305248 | 156306468 | PCT | |
| Ahy19g1912 | 19 | 110613090 | 110613977 | Ahy5g1907 | 5 | 87321651 | 87322828 | PCT |