Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy5g1897 | ATGGCTTGTTGGTCTGCAGAAAATGCCACTAAGGCCTATCTCAACACTTTGAAAATGGGACAAAAAGCGAAAGAACCGGCTGTGGCGGAGTTTATATCGGCCTTGGCCGCCGGGAACAATGCGCAGCTAATGGTGGTGGCTTGTGCCGGGGCGGCCGACTCAGCCACCTTACTAGCCCTAGTAGAGGCGGCAAATCAAACCGGGGGACACGTGATTTGCATTGTTCCAACTCATGAAGACTTAAATGGGTCAAAGTATGTTGTTGGAAGAACAGCATCAAATGAAGTCGAATTCATGGTTGGAGAGGCTGAGATCCTTCTCCTTAACCAGTACGCCGCCGCCGACTTCGTCCTCATCGATTGCAAGCTCAAGAACCATGAAGAGATTCTGAAGGCAGTTCAAGTTGGTGGAAGGAAGCAAAATGGGACATTGGTGGTTGGTTACAATGCATTTGTGTGTAAAGGGTCTAGGTGGTCCTCTTCATCATCTTGTGGTTCAAGAACTCAGTTACTTCCAATTGGAGAAGGATTATTTGTAACTAGGTTTGGATCAAGCACAGTTCATACTCCAAAACATGGAATCAACAAGATCAAGAGTCGTTGGATTGTTAAGGTTGATAAATGCACTGGGGAAGAACATGTTTTCAGGGTTAGGTTTCCACAAGGAAAAGTTATTCAAGCTTAA | 684 | 0.4591 | MACWSAENATKAYLNTLKMGQKAKEPAVAEFISALAAGNNAQLMVVACAGAADSATLLALVEAANQTGGHVICIVPTHEDLNGSKYVVGRTASNEVEFMVGEAEILLLNQYAAADFVLIDCKLKNHEEILKAVQVGGRKQNGTLVVGYNAFVCKGSRWSSSSSCGSRTQLLPIGEGLFVTRFGSSTVHTPKHGINKIKSRWIVKVDKCTGEEHVFRVRFPQGKVIQA* | 228 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy5g1897 | 227 | Gene3D | Vaccinia Virus protein VP39 | 5 | 181 | IPR029063 | - | |
| Ahy5g1897 | 227 | PANTHER | BNAA09G06020D PROTEIN | 1 | 227 | - | - | |
| Ahy5g1897 | 227 | PANTHER | DUF1442 FAMILY PROTEIN | 1 | 227 | IPR009902 | - | |
| Ahy5g1897 | 227 | Pfam | Protein of unknown function (DUF1442) | 3 | 216 | IPR009902 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy5g1897 | Ahy-Chr5 | 87238093 | 87239124 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy5g1897 | - | - | gmx:100775961 | 317.005 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy15g3389 | 15 | 156375200 | 156376257 | Ahy5g1897 | 5 | 87238093 | 87239124 | hybridization | |
| Ahy5g1897 | 5 | 87238093 | 87239124 | Ahy19g1925 | 19 | 111482192 | 111483500 | PCT | |
| Ahy5g1897 | 5 | 87238093 | 87239124 | Ahy9g1563 | 9 | 84360709 | 84361792 | PCT | |
| Ahy19g1925 | 19 | 111482192 | 111483500 | Ahy5g1897 | 5 | 87238093 | 87239124 | PCT | |
| Ahy9g1563 | 9 | 84360709 | 84361792 | Ahy5g1897 | 5 | 87238093 | 87239124 | PCT |