Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1925 ATGGCTTGTTGGTCTGCAGAAAATGCCACTAAGGCCTATCTCAGCACTTTAAAAATGGGTCAAAAGGCGAAGGAACCAGACGTGGCTGAGTTCATATCAGCACTAGCAGCAGGAAACAACGCACAAACAATGGTCGTTGCCTGCGCCGGCTCAGCCGGATCCACCACACTAGCCTTGGTGGCCGCTGCAAACCAAACCGGCGGCCAAGTTATCTGCATTGTAAACAGCCATCAAAATCTAAAAGCCTCCAAAACCGCATTGGGTACCGCGGCACAACGAGTCGAATTCATGGTTGGAGAAGCACAAGAACTAATGGTAAACCACACTTTTGATTCAGCTGATTTTCTGCTAATAGATTGCAACCTTGATAGCCACGAAGAAATCCTCAAGAAAGTGCATGGAAATAATAACAATGGAACAGTAGTTGTTGTTGGATACAATGCATTTAGTTGCAACGGGTCTTCTTGGTTTGGTTCAAGGACTACTCAATTGCTTCCAATTGGTGAAGGACTTTTGGTAACTAAATTTAGAATTGGATCCAATGTGATTAATAGTCCTAAGTATGGTGGAGGAAACAGAGTAATGAGTAACAAGAGCCGTTGGGTTGTTAAGGTTGATAAATGCACAGGGGAAGAACATGTTTTCAGGGTCAGATTTCCACCACAAGGGAAAGTCATTCATGCTTAA 687 0.4396 MACWSAENATKAYLSTLKMGQKAKEPDVAEFISALAAGNNAQTMVVACAGSAGSTTLALVAAANQTGGQVICIVNSHQNLKASKTALGTAAQRVEFMVGEAQELMVNHTFDSADFLLIDCNLDSHEEILKKVHGNNNNGTVVVVGYNAFSCNGSSWFGSRTTQLLPIGEGLLVTKFRIGSNVINSPKYGGGNRVMSNKSRWVVKVDKCTGEEHVFRVRFPPQGKVIHA* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1925 228 Pfam Protein of unknown function (DUF1442) 3 216 IPR009902 -
Ahy19g1925 228 Gene3D Vaccinia Virus protein VP39 5 175 IPR029063 -
Ahy19g1925 228 PANTHER DUF1442 FAMILY PROTEIN 1 224 IPR009902 -
Ahy19g1925 228 PANTHER BNAA09G06020D PROTEIN 1 224 - -
Ahy19g1925 228 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 148 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1925 Ahy-Chr19 111482192 111483500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1925 - - adu:107466072 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1925 19 111482192 111483500 Ahy19g1925 19 111482192 111483500 ECH
Ahy19g1925 19 111482192 111483500 Ahy9g1563 9 84360709 84361792 hybridization
Ahy15g3389 15 156375200 156376257 Ahy19g1925 19 111482192 111483500 PCT
Ahy5g1897 5 87238093 87239124 Ahy19g1925 19 111482192 111483500 PCT
Ahy19g1925 19 111482192 111483500 Ahy15g3389 15 156375200 156376257 PCT
Ahy19g1925 19 111482192 111483500 Ahy5g1897 5 87238093 87239124 PCT