Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1888 ATGTCTGAACCTCGAAAAGATTCCCTTATTCATGAGCTTCAGATAATATGGGATGAAGTTGGGGAGTCCGAGACTGACAAGGATAGGATGTTGTTTGAGATTGAAGAAGAGTGTATAGAACTATACAGAAGAAAGGTAGATCAAGCAAATTGGTCCAGAGTTCAACTAAGGCAGGAAATCGCTGACTGCGAGGCAGAGCTTGCAACTATCTGTTCAGCATTGGCAGAGAGACCGATTCACATTAGGCAGGATCAAAATGTTGGAAGCTTGAAACAAGAGCTAGCAAGAATTTACCCAGAGCTGGAGGAAATGCGGAAAAGGAAGTCTGATCGTAGAAATCAACTTATAGATGTTCGTGAGCAGATTCAAAGTATCTCAAATGAGTTGTATAGTCCTGGAGAGCACGCTCCACCCGTTATAGATGAAAATGATTTATCATTGAGAAAGCTTGAAGAATTGCATAGGCAGCTTTATGCACTACAAAAGGAGAAGAGCGATCGCCTGAAGACAGTCCAGGACCACTTGCGTACCTTAAGTTCTCTTTGTTCGGTACTCGGTTTGGACTTCAAGGAGACAATAGACAGAGTTCATCCTAGTTTAGGAAATTCAGAGGGATATAAGAGTATAGATAATGATACTATCAAGCAATTGACTGTTGCTATACAAGATCTGCGAGAAATTAAATTACAGAGAATGGAGAAGCTGCAAGATATTGCAACAACAATGTTGGAACTTTGGCATTTGATGGATACGCCTGTTGAAGAGCAACAGATGTTCCAAAATGTTACTTGTAATATAGCTGCTTCAGAAGATGAAATAACCGAACCGAACACTTTGTCCGAGGGCTTCATCAGTCACGTTGAGGAAGAAGTGTTAAGGTTAGAAGCGTTAAAATCAAGCAAAATGAAAGAGCTTGTTTTGAAGAAAAGAGCAGAGCTAGAGGAGATTTGTCAGAAGACTCATTTGGTTCCAGAACTTGACAGTGCACTGGAATATGCTATTGAAACTATTGAATCTGGAACTGTGGACCCTGCTTGGGTTCTTGAACAACTTGAACTTCATATTGCCAAAGTCAAAGAGGAAGCATTTAGCAGAAAAGATATACTTGAAAAGGTTGAGAAATGGTTATCAGCATGTGAAGAAGAGTCTTGGCTTGAGGAATACAACAAGGATGAAAATCGATATAATGCTGGTAGAGGGACTCATCTTAATCTCAAGCGAGCTGAGAAAGCTCGTGCCTTGGTTACCAAAATTCCAGGAATGGTAGAGGCATTGAATTCAAAAACTACAGAATGGGAACAAGAGAGAGGCATTGAGTTCAAATATGATGATGCCCGTCTGCTCTCTATGCTTGAAGATTACACCAACTCGCGGCAAGAAAAAGAGCAAGAACGTCGTAAGCTGCGGAACCTGAAGAAACATCAGGGACAATTGATAGCAGAACAGGAAGTACTATATGGGTCAAAACCAAGCCCAAAGGCTAATAGTGCAAAAAAGCTTTCAAGGCAGTCAAGTACAACTGGATCTGGTAGAAGAACCTCCCTTGGTGCAAGTTCAAAACTGGAAGCGAAAGCTACTCACTCATATTTCTCATCAGCTAAAACAGGAGTTGATATTGCTCATTCTCCTTTGGAAAAAAACTTATTTGGTAGTGGAAGTGTTCGCAAGATAGATTCTCCTTCAGTGAGACAACCTTTTTCACCCATCTCTTCGACAGAATCATCAAAAGCAAACTCAGCAAATACCACAGATGAACTAAAAATGCAGCAGACTGAGGAGTTGGTGAAAACATTAACACTTTACAATATGCCATTCACTAGTCCCTCAAAGACATCAACAGTGGTAGATGAAGAGAATAAAACCCCAAAAGCAATGCCATTTTCTCCCTTCTCTTCAACATTACCACCAAATTCCTCAAATGAATAG 1926 0.4055 MSEPRKDSLIHELQIIWDEVGESETDKDRMLFEIEEECIELYRRKVDQANWSRVQLRQEIADCEAELATICSALAERPIHIRQDQNVGSLKQELARIYPELEEMRKRKSDRRNQLIDVREQIQSISNELYSPGEHAPPVIDENDLSLRKLEELHRQLYALQKEKSDRLKTVQDHLRTLSSLCSVLGLDFKETIDRVHPSLGNSEGYKSIDNDTIKQLTVAIQDLREIKLQRMEKLQDIATTMLELWHLMDTPVEEQQMFQNVTCNIAASEDEITEPNTLSEGFISHVEEEVLRLEALKSSKMKELVLKKRAELEEICQKTHLVPELDSALEYAIETIESGTVDPAWVLEQLELHIAKVKEEAFSRKDILEKVEKWLSACEEESWLEEYNKDENRYNAGRGTHLNLKRAEKARALVTKIPGMVEALNSKTTEWEQERGIEFKYDDARLLSMLEDYTNSRQEKEQERRKLRNLKKHQGQLIAEQEVLYGSKPSPKANSAKKLSRQSSTTGSGRRTSLGASSKLEAKATHSYFSSAKTGVDIAHSPLEKNLFGSGSVRKIDSPSVRQPFSPISSTESSKANSANTTDELKMQQTEELVKTLTLYNMPFTSPSKTSTVVDEENKTPKAMPFSPFSSTLPPNSSNE* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1888 641 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 520 IPR007145 GO:0000226|GO:0008017
Ahy5g1888 641 Coils Coil 451 481 - -
Ahy5g1888 641 MobiDBLite consensus disorder prediction 481 521 - -
Ahy5g1888 641 MobiDBLite consensus disorder prediction 557 586 - -
Ahy5g1888 641 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 529 595 IPR007145 GO:0000226|GO:0008017
Ahy5g1888 641 MobiDBLite consensus disorder prediction 551 586 - -
Ahy5g1888 641 Coils Coil 39 66 - -
Ahy5g1888 641 MobiDBLite consensus disorder prediction 625 641 - -
Ahy5g1888 641 MobiDBLite consensus disorder prediction 494 521 - -
Ahy5g1888 641 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 520 - -
Ahy5g1888 641 Gene3D - 354 488 - -
Ahy5g1888 641 MobiDBLite consensus disorder prediction 604 641 - -
Ahy5g1888 641 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 529 595 - -
Ahy5g1888 641 Pfam Microtubule associated protein (MAP65/ASE1 family) 9 493 - -
Ahy5g1888 641 Coils Coil 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1888 Ahy-Chr5 87079150 87084366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1888 8 499 EF-hand Containing Proteins AT5G62250 57.256 3.07e-175 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1888 K16732 - gmx:100777734 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3397 15 156465058 156470288 Ahy5g1888 5 87079150 87084366 hybridization
Ahy5g1888 5 87079150 87084366 Ahy19g1939 19 112685203 112690300 PCT
Ahy5g1888 5 87079150 87084366 Ahy9g1576 9 85356352 85361475 PCT
Ahy19g1939 19 112685203 112690300 Ahy5g1888 5 87079150 87084366 PCT
Ahy9g1576 9 85356352 85361475 Ahy5g1888 5 87079150 87084366 PCT