Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1939 ATGTCTCAACCTCAAAGTGATCCCCTTTTGCAAGCTGAAACAACTTGTGGGTCCCTCTTGTATGAACTTCAGATAATATGGGATGAAGTCGGGGAGAATGAGACTGAGAGAGATAGAATGCTTTTTGAGCTTGAACAAGAGTGCCTAGAAGTATATAGAAGGAAGGTTGATCATGCCAATCGTAATAGAGCTCAATTAAGGCAGGCAATTGCTGATTGCGAGGCGGAACTTGCGGCCATTTGTTCAGCAATGGGGGAGCGACCAGTCCATACTAGGCAGTCTGATCAAAATGCTGGAAGTTTAAAGGAAGAGCATGCAAGAATTCTGCCACAGTTGGAGGAGATGCGTAAAAGGAAGTCTGAGCGTAGAAATCAATTTATAGAAGTTCACGAGCAAATTCAAGTTATCTCAATGGAGATTTATGGACCAAGAGAATATATTCCAGCTGTTGTAGATGAAACTGATTTGTCCTTGAGAAAACTTGAAGATCTGCACAAACAGCTGCAGGCACTTCAGATTGAAAAGAGTAGTCGCCTCAAAAAGGTCCAGGAGCACCTGTATACGTTGAACTCTCTATGCTCAGTGCTTGGTCTAGACTTTAAGCAGACAATCAATGAAATCCATCCCAGCTTAGGCGAATCAGAAGGATCTAACAGTGTAAGTAATGATACCATCCAACGATTGGCTGTTGCTATACAAGAACTACGCGAAGTAAAATTGCAGAGAATGCAGAAGCTCCAAGATCTTGCAACATCAATGTTGGAGCTCTGGAACTTGATGGATACACCTATTGAAGAGCAACAGATGTTTCAGAATGTTACATGTAACATAGCTGCTTCAGAACATGAAATAACTGAAGCTAACACCTTGTCTGTGGACTTCATCAAATGTGTTGAAGCAGAAGTATCAAGATTAGAAGAGTTAAAATCAAGCAAAATGAAAGAGCTTGTTTTGAAGAAGAGAACAGAACTAGAGGAGATATGTCGAAAGACTCATCTGGTTCCAGAAATAGATAGTGCTGTTGAATATGCTGTTGAAGCTATAGAGTCCGGAACTGTGGACCCTGCTTGTGTGCTTGAACAAATTGAGGTTCAGATTGCTCAAGTTAAAGAGGAAGCTTTAAGCCGAAAAGAAATACTTGAAAAGGTTGAGAAATGGTTGGGAGCCTGTGATGAGGAGTCTTGGCTTGAGGAATACAACAGGGATGACAATCGATACAATGCTGGGAGAGGTGCTCATCTTACACTCAAGCGAGCTGAGAAAGCACGTGCCTTGGTTAATAAAATCCCAGCAATGGTAGATGCATTGACTTCAAAAACTTTAGCATGGGAAAAGGAAAAAGGCATTCAGTTCACCTATGATGGTATTCACCTGCTCTCCATGCTGGAAGAGTACAACATATTACGGGAAAAGAAAGAGCAAGAACGCCGCAAGCAGCGGGATCTGAAGAAACTTCAGGGACAAATGATAGCGGAACAGGAGGCACTATATGGGTCAAAACCGAGCCCTTCGAAGCCCCAGAGTGTAAAGAAGGGACCTAGGATGTCAACTGGTGGGGCAGCTAGTCGAAGAGTTTCCCTCGGAGGAGCAATGATTCAAACTCCAAAACCTGATTCAAAAGCTAATTCTCGTGTTGCAAGAAAGACTGATAAAGCACGCCAAGTTGAGCAGAATTACTTGGATGATGGTGTTTCATGTTTATCATCAGCTAGAAGAGGACTAGATATTGCTGGTGTTCCTGTAAAAAAGTATTCATTTGGTGCCGGGAGCACTCATGACATAGAACCACCACCTCTTGCTCGACTGCCTTTTTCGCCTATCACTTCGAAAGTATCATCAAATACGAATATGGCAAATGCCAAGGATGAATTGAATATACAGAGTGAGAAGTTGCAGAAAACAATTTCACTTAACAATATGCCATTCTCTACTCCCTCAAAGACAGCTGCTATTGTGGTGGATGATGAGAATAGAACACCAAAGGCAATGCCAATTCCCGTCCCTTCTACACCTTCCACTGTTTCAGTTCCAATGAAGATGGTCATGACTCCAGCTCCTGCTTTTGGAGGTGGTGAATTGGTCCGTGACATTGAATATTCCTTTGAAGAAAGACGTCTTGGTTTTGTTGTACAATGA 2136 0.4242 MSQPQSDPLLQAETTCGSLLYELQIIWDEVGENETERDRMLFELEQECLEVYRRKVDHANRNRAQLRQAIADCEAELAAICSAMGERPVHTRQSDQNAGSLKEEHARILPQLEEMRKRKSERRNQFIEVHEQIQVISMEIYGPREYIPAVVDETDLSLRKLEDLHKQLQALQIEKSSRLKKVQEHLYTLNSLCSVLGLDFKQTINEIHPSLGESEGSNSVSNDTIQRLAVAIQELREVKLQRMQKLQDLATSMLELWNLMDTPIEEQQMFQNVTCNIAASEHEITEANTLSVDFIKCVEAEVSRLEELKSSKMKELVLKKRTELEEICRKTHLVPEIDSAVEYAVEAIESGTVDPACVLEQIEVQIAQVKEEALSRKEILEKVEKWLGACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARALVNKIPAMVDALTSKTLAWEKEKGIQFTYDGIHLLSMLEEYNILREKKEQERRKQRDLKKLQGQMIAEQEALYGSKPSPSKPQSVKKGPRMSTGGAASRRVSLGGAMIQTPKPDSKANSRVARKTDKARQVEQNYLDDGVSCLSSARRGLDIAGVPVKKYSFGAGSTHDIEPPPLARLPFSPITSKVSSNTNMANAKDELNIQSEKLQKTISLNNMPFSTPSKTAAIVVDDENRTPKAMPIPVPSTPSTVSVPMKMVMTPAPAFGGGELVRDIEYSFEERRLGFVVQ* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1939 711 Coils Coil 614 634 - -
Ahy19g1939 711 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
Ahy19g1939 711 Coils Coil 295 315 - -
Ahy19g1939 711 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 636 IPR007145 GO:0000226|GO:0008017
Ahy19g1939 711 MobiDBLite consensus disorder prediction 493 552 - -
Ahy19g1939 711 Gene3D - 365 499 - -
Ahy19g1939 711 Coils Coil 458 488 - -
Ahy19g1939 711 Coils Coil 151 171 - -
Ahy19g1939 711 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 636 - -
Ahy19g1939 711 Coils Coil 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1939 Ahy-Chr19 112685203 112690300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1939 11 539 EF-hand Containing Proteins AT5G62250 58.071 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1939 K16732 - gmx:100777734 1121.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3397 15 156465058 156470288 Ahy19g1939 19 112685203 112690300 ECH
Ahy19g1939 19 112685203 112690300 Ahy19g1939 19 112685203 112690300 ECH
Ahy19g1939 19 112685203 112690300 Ahy9g1576 9 85356352 85361475 hybridization
Ahy15g3397 15 156465058 156470288 Ahy19g1939 19 112685203 112690300 PCT
Ahy5g1888 5 87079150 87084366 Ahy19g1939 19 112685203 112690300 PCT
Ahy19g1939 19 112685203 112690300 Ahy15g3397 15 156465058 156470288 PCT
Ahy19g1939 19 112685203 112690300 Ahy5g1888 5 87079150 87084366 PCT