Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1604 ATGGGAGAAACCCAACTTGAAGAGTCTGAAGCAACTAATAGACAGATCAGCAGTAAAACAAAGTCCGGTTCTAAACTGATTGTAGAGAAAACATTTGAGCATCCTGAGTGGCTACCTGATGGCTGGAATGTGGATTTCAAAACTCGAAAAAGCGGTTCAGCTATGGGACAGGGATATAAGTGTTACATTAATCCGCATGGAAAGAAATTCTACTCCAAATTAGAAGTGTTACGGTATCTCGAAACTATAAAGGGCAACAACTGCAATTCCAGAAAGGAGGAATCCAATACCATCCATTCTCCAAACAATGATGCACTTGAGAAGCCCATGGTTGAGACATCCAGGACTGAGAATTCCATGGCTGAGAAGTCCACGGCTGGGAAGCCCAAGGCTGGGAAGCCCAGGGGTGAGAAGTCTACGACTGGGAAGCCCAGGTCTCAGAAGTCCACAGCTGAGAAGTCCACAGTTGAGAAGCCCAGGGTGGAGAAGTCCACCACTGAGAAGTCCACAGCTGAGGATTTACCACCTGGCTGGATAATAGAAGTCAAAGAAAGGAAGAACAGCAAAATCAATAGAAAAGATTTGTTATATATAGATCCAGAGAGTGGATATGTATTCCGTTCCAAGAAGGATGCACTGCGCTATCTCGAGTCTGGAGATATAAGTTCGTGTGCGATTAAACCATTTAAACGGGAAATCCAAGATGAAGATAAATTATCTCCGGCATCTACAGTCAAAAAGCAGAAAATAAAGCAGTCTGGAATTAACCGACAACTTTTTGCCGGCAAAGAAATATCCGATGAAAGCAGCTTAGAATTGCCAGATGCTAACAGCTCAGAAAAAAGGCAACATGTGGAGGTGTCTTCTGGAATGATGGCTCCTTTTGTTCCTACAGGGGAATCTATTGGCCAAATTCAATCGTTAAAGAATGGAGTTGCATACCCTCCCAAAACAAAGAAAATGTCTGATCCAGATGATGTGCAAAATAAGAATGATGTTGTCAATGTGGTTGAAAATGCTAGTAAGAAGAATCACAGTAACCCTACTGTATCAAAAAACAGGGGGTTCAGTGTGGCTCACCGGTCTTCGCCGAGACTTGCCGCAGCAGAACCTGACCAATTGACTAACAGCCTGACCAGTGAACAGTGTCTTGAAGTTCCAAGAAGAAACTTGAGAAGAGGTAGTCAGGGTTTGGCCGCTGACGATCACTCTTTGAAAGAATCCAAATTGCTTGCAAGTGAGATTGCTAAAAGTGGAGAAATTTGTTCCGACTTGAACAAATCCAGCAACAAGAAAGAGCCTTCGGTTCCTCGGCGAGCATCAAAAAGACTTGCTGGATCTGAGCCTGAGCTGATGAGCAACTCCCTCTCCTATGAAAGAGCTCCGGAATATAATAAAAGCAAAAAGTCTAAAAGTGGGATCAATACAAACTTGCTTTCACGTGATGGTGAGGCAGGGCTGAAGCTTGTAGAACATGGATCAATGAATGGATTGTCATCCACCAGAGGGAGGAAACACCCCCAAACCTTGCCTGTAACCAAAGATAAACTGGATAAACGTAAAAATGAGGAAATGAATGATGAGAAATCAGAACTTGAGCAATCTCTGGCATTCCATTATTCTTGGTCTGACCCAAGTTTGGAGTTTGCAATTAAGACCCTCACTGGCACATTACCTGCAGAGGATTCAGTTGCTAACAGACCTATAGTGATTTCTGAAACAGATAAGTTGCCTGAAAATGATGTGTTTAAGAATGATACAGGAAGCAACAGTGACAAAAAACCCAAGGTAAATTCAAGTAAATCCAAGAAGAAGAAAGAGCCTAAAGTGCCTACGCGATTGTCTAAGCGACTTTCTGGCCATGATCCTGAGGTACTTCCTACTGAAACAGCACCTGAATATTCCACTAGAAAATCAGGTAAGAATAAACCAGATGCAAATGAGATTTTAACTAATGGAGCATCCGGGAAGCTTCATGCTGGGGAAGAATCATCCAACCTTATTGTTCATGCATCTGACATGTTGAAAACTAGCAAATGTGGTGAATCATCGAATGGTGATGAGTTGCAAAAATCACAAACTGTTCCCAATGAACAACAACGGGGGCCTGAAGCTGAAAGTATTAATGAGAGATCAGAGCCACAGTTCCCTGTACAGTTTGGGGACAACTGGTCGGATCCATGTGTAGAATTTGCAGTTAAGACTCTCACTGGTTCGGTGACTGTTGATGCTGCCAATGTGCCTGTTGTGACACTTGATGTCAATGACCCACCAAATGAGGAATTGTCGGAGAATGCAGTGCAGAAGAGCAGTGATGCTGCTGCCGATAACAACAATCATTGCCAGATCAAGGAAGTGCTTAATGCACCAGTTTGCCGGCCATCGGAACAATGCTTAGAGCAAGGGCAACCTGAGTTGGGATCCAACCCTACATCCTATCAAAGTGATCCTGCATTTGCAAGTAGTGTGTCTTGCGGTGATGAAGGCAAAATAACAAGGAACTCTGATGGGGGACAATCTCTACATGTTGAAGCTGGGAATATGACGCAAATTGATATAAACACACTCTTTTTTGACGACCCATTCACAGAAGATGAACAGATTCTTGAGGATAATTCTATTGCAGAACAAGCACAGCCTGGAACAGAAGCTACAAACCGTGATAACTCTGAAAGAGAGTTTTGTGTTTCCTTCATGGACACTTGGTCAGACCCATGCTTAGAATTTGCATTTAAGACTCTCACGGGAGATATCCAAGTTGAGGAAAATATGGCGGGGCAAGGATGTTTCCCGGAACATGCGAACCGACATGACCAGAGAAATGGTGGCTCGGCATTACCAGAAATCGGATCTTCCAGCATCTCCCGAAGTCACATGGCAGAGAAATCCATGCCGCCACAACCACCATCAATGAGCCCTTCATTCCTCTCCCGAAGTCACATAGCAGAGAAATCCGTGCTGCCACAACCACCATCATTGAGCCATTCCTTCCTCTCCCAAAATCACATGGCAGAGAAATCCATGCCGCCACAACCACCATCATTGAGCCATTCATTTCTCTCCCAAAGTCACATGGCAGAGAAATCCGTGCCGCCACAACCACCATCAATGAGCCCTTCATTCCTCTCACGAAGTCACATGGCAGAGAAATCCGTGCCGCCACAACCACCATCAATGAGCCCTTCCTTCCTCTCCGGAAGTCACATGGCAGAGAAATCCATGCTGCCACAACCACCATCAATGAGCCCTTCCTTCCTCTCCGGAAGTCACATGGCAGAGAAATCTGTGCCGACACAACCACCATCATTGAGCCCTTCCTTCCTCTCCCGAAGTCACATTGCAGAGAAATCTGTGCCGACACAACCACCATCAATGAGCCCTTCCTTCCTCTCCCTAAGTCACATGGCAGAGAAATCTGTGCCGGCACAACTACCATCAATGAGCCAGCCCTTCCTCTCCCTAAGTCACATAGCAGATAAACCCATGCCGGCACAACCACCATCGATGAGCCCTTCTTTCTTCCCCCCGACACAACAGTCATCACAACAGTCATCGATGAACTCTTCAATCTTCCCCGAAGAAAAATCAAGCCAGCAGCACACAGGAACCGATGCGCAGAGGCATTATTCTCAGTACAACATTAATTTTCAAAGAAGGTAA 3660 0.4503 MGETQLEESEATNRQISSKTKSGSKLIVEKTFEHPEWLPDGWNVDFKTRKSGSAMGQGYKCYINPHGKKFYSKLEVLRYLETIKGNNCNSRKEESNTIHSPNNDALEKPMVETSRTENSMAEKSTAGKPKAGKPRGEKSTTGKPRSQKSTAEKSTVEKPRVEKSTTEKSTAEDLPPGWIIEVKERKNSKINRKDLLYIDPESGYVFRSKKDALRYLESGDISSCAIKPFKREIQDEDKLSPASTVKKQKIKQSGINRQLFAGKEISDESSLELPDANSSEKRQHVEVSSGMMAPFVPTGESIGQIQSLKNGVAYPPKTKKMSDPDDVQNKNDVVNVVENASKKNHSNPTVSKNRGFSVAHRSSPRLAAAEPDQLTNSLTSEQCLEVPRRNLRRGSQGLAADDHSLKESKLLASEIAKSGEICSDLNKSSNKKEPSVPRRASKRLAGSEPELMSNSLSYERAPEYNKSKKSKSGINTNLLSRDGEAGLKLVEHGSMNGLSSTRGRKHPQTLPVTKDKLDKRKNEEMNDEKSELEQSLAFHYSWSDPSLEFAIKTLTGTLPAEDSVANRPIVISETDKLPENDVFKNDTGSNSDKKPKVNSSKSKKKKEPKVPTRLSKRLSGHDPEVLPTETAPEYSTRKSGKNKPDANEILTNGASGKLHAGEESSNLIVHASDMLKTSKCGESSNGDELQKSQTVPNEQQRGPEAESINERSEPQFPVQFGDNWSDPCVEFAVKTLTGSVTVDAANVPVVTLDVNDPPNEELSENAVQKSSDAAADNNNHCQIKEVLNAPVCRPSEQCLEQGQPELGSNPTSYQSDPAFASSVSCGDEGKITRNSDGGQSLHVEAGNMTQIDINTLFFDDPFTEDEQILEDNSIAEQAQPGTEATNRDNSEREFCVSFMDTWSDPCLEFAFKTLTGDIQVEENMAGQGCFPEHANRHDQRNGGSALPEIGSSSISRSHMAEKSMPPQPPSMSPSFLSRSHIAEKSVLPQPPSLSHSFLSQNHMAEKSMPPQPPSLSHSFLSQSHMAEKSVPPQPPSMSPSFLSRSHMAEKSVPPQPPSMSPSFLSGSHMAEKSMLPQPPSMSPSFLSGSHMAEKSVPTQPPSLSPSFLSRSHIAEKSVPTQPPSMSPSFLSLSHMAEKSVPAQLPSMSQPFLSLSHIADKPMPAQPPSMSPSFFPPTQQSSQQSSMNSSIFPEEKSSQQHTGTDAQRHYSQYNINFQRR* 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 421 478 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 431 445 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 128 142 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 508 533 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 1077 1107 - -
Ahy5g1604 1219 SUPERFAMILY DNA-binding domain 169 229 IPR016177 GO:0003677
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 677 718 - -
Ahy5g1604 1219 PANTHER OS04G0193200 PROTEIN 4 579 IPR038945 -
Ahy5g1604 1219 Gene3D - 137 259 - -
Ahy5g1604 1219 Gene3D - 1 133 - -
Ahy5g1604 1219 PANTHER OS04G0193200 PROTEIN 573 979 - -
Ahy5g1604 1219 PANTHER OS04G0193200 PROTEIN 4 579 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 1 23 - -
Ahy5g1604 1219 PANTHER OS04G0193200 PROTEIN 573 979 IPR038945 -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 945 960 - -
Ahy5g1604 1219 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 28 101 IPR001739 GO:0003677
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 1003 1029 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 677 703 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 266 286 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 1003 1107 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 1174 1219 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 1158 1219 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 339 358 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 494 533 - -
Ahy5g1604 1219 SUPERFAMILY DNA-binding domain 32 89 IPR016177 GO:0003677
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 339 373 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 87 123 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 579 665 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 268 282 - -
Ahy5g1604 1219 Pfam Methyl-CpG binding domain 172 222 IPR001739 GO:0003677
Ahy5g1604 1219 Pfam Methyl-CpG binding domain 35 84 IPR001739 GO:0003677
Ahy5g1604 1219 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 164 236 IPR001739 GO:0003677
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 150 169 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 929 975 - -
Ahy5g1604 1219 MobiDBLite consensus disorder prediction 87 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1604 Ahy-Chr5 42101475 42108726 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1604 - - aip:107643060 2169.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1604 5 42101475 42108726 Ahy13g2884 13 115467529 115473356 PCT
Ahy5g1604 5 42101475 42108726 Ahy3g2546 3 112948902 112954726 PCT