Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1560 ATGAGTGGCCTTCCGAAGCACGAACGCCGATGGGCGTCAGACACAGTTCCAGAGAAAGTAACAGTTAGCAGCGGGACCTCGCCGGGAACAGAATACAGTTCCTTTGCCGATGATGAGTATGTTGAGGTTACTCTCGATCTTCAAGACGATAACACCATCGTTCTCCGCGGCGTCGAGCCGGTCACAGTCCTCAACATCGACGACGCCGCAGCCACAAGTAGTGGATACGCGACTCCGGCATCCTCCGTCAGATCGCCGACGGGAAGGAGGAGTCCTTCCAATAGGCTGCGGCAGTTCTCTCAGGAGCTGAAGGCCGAGGCGTTTGCTAGAGCGAGGCAGTTCTCGCAAGAGCTGCGGCGGTTTTCTTGGAGCCACGGCGGCGAGGCAGCGTTGGCCGCTCGAGATCTCAGGAAGCAACGCGCTCAGCTTGATCGAACTCGCTCCGGCGCTGGCAGAGCGCTCCGTGGACTCAGATTCATCAGCAGTAAATCCAATGGCGTGGATGCCTGGAACGAGGTGCGGAGCAATTTTGATAAGCTCGCCAAGGACGGCTTTCTCCACCGCACCGATTTTGCGCAATGCATAGGGATGAAAGATTCCAAGGAGTTCGCGCTAGAACTGTTCGATGCTCTGAGTCGTAGACGAAGACTGAAGGTTGAAAAGATTAGCAGAGACGACCTATTCGAGTTCTGGTCCCAAATTACTGATCAAAGTTTTGATTCGCGGCTCCAGCTCTTCTTCGACATTGTGGACAAGAATGAAGACGGTAGAATCGCAGAAGAAGAAGTGAAGGAGATAATCGAGTTAAGCGCTTCAGCAAATAAGTTATCCAGACTGAAGGAGCAGGCCGAAGAATATGCAGCTCTTATCATGGAAGAGTTAGACCCTGAAAGACTTGGCTACATCGAGCTATGGCAATTGGAGACCCTTCTTTTACAAAAAGACACGTACCTAAGCTACAGCCAAGCCTTAAGCTACACAAGTCAAGCTTTGAGTCAGAACCTCCACGGGCTAAGGATGAGAAGTCCGATACGTAGGATGAGCCGCAGGTTGCTCTACTATTTGCAAGAAAATTGGAAGAGACTTTGGGTTTTAACATTGTGGATTGCCACAATGACTGGGCTCTTCACGTGGAAGTTCATTCAGTACAAGCAGAAAGATGCTTTTCATATCATGGGTTACTGTCTACTCACGGCCAAAGGCGCGGCTGAGACTCTAAAGTTAAACATGGCACTGATACTCTTGCCCGTATGCAGAAACACTATAACCTGGCTCAGGTCTACTAAGCTGGCTTACGTTGTACCTTTTGATGATAACATCAACTTTCATAAGACTATTGCTGCGGGCATAGTGATTGGTATTATACTTCATGCTGGTGATCACCTTGCTTGTGATTTTCCAAGACTCGTAAATACGACAGAAGCTCTTTATGACAAGTATTTGCAAGGCGTATTTGGCAAACATAAACCAAGTTACGGAGACCTTGTTAAAGGGCCCGAGGGTGTGACTGGAATTCTGATGGTGATTTTTATGGCAATAGCGTTTACACTTGCAACAAAACTGTTTAGGAGAAATCTTATTAAGCTACCTAAACCATTTAATAGACTCACTGGCTTCAATGCTTTCTGGTATTCGCACCACCTCTTTGTCATTGTCTATGTTCTGCTCATCATCCATGGTGTAAAGCTTTACCTCGTGACCAAATGGTACCATCAAACGACATGGATGTATCTTGCAGTTCCAGTTTTACTTTATGCTGGAGAAAGAACACTCAGATTCTTCCGTTCTGGCCTCTACACAGTCCATCTAAAAAAGGTTGCCATTTATCCTGGAAATGTTCTCACATTACAAATGTCAAAGCCACCACAATTTCGTTACAAGAGCGGACAGTACATGTTTGTGCAATGTCCCGCTGTCTCTCCTTTTGAGTGGCATCCCTTTTCTATTACCTCCGCCCCTGACGATGACTATCTGAGTGTTCACATTCGGCAACTGGGTGATTGGACACAGGAGCTTAAAAGGGTATTCTCTGAGGCCTGTGAGCCTCCGGTAGCAGGGAAAAGTGGACTTCTCAGGGCAGATGAAACAACCAAGAAAAGTCTACCCAAGCTGAAGATAGACGGACCTTACGGTGCGCCAGCACAAGACTATAGAAAATATGATGTCCTATTACTTGTCGGTCTTGGAATAGGAGCAACTCCTTTTATCAGCATTTTGAAAGATCTGCTCAACAGCATTGTCAAAATGGAGGAGCTGGCGGATTCAGTCTCTGATTCAAGTAGAGGTTCAGAACATAGTGCTGTGAATACAGACCCGGCATCTCTAAACAAGATTTCTCCAAAGCGGAAGAAAACACTCAAGACTACCAACGCTTATTTCTACTGGGTAACAAGAGAGCAAGGCTCTTTCGATTGGTTTAAAGGGGTCATGAATGAAGTTGCCGATCTAGACCAAAGGGGTGTCATCGAGATGCACAACTACTTGACCAGCGTATACGAGGAAGGCGATGCCAGATCCGCCCTCATCACCATGGTGCAGGCCCTCAACCATGCAAAAAATGGAGTTGATATTGTTTCAGGGACAAGGGTGCGAACTCATTTTGCCAGGCCAAACTGGAAGAAAGTCTTCTCTAAAATATGTTCAAAGCACAGTAATGGAAGAATAGGGGTATTTTATTGCGGTGCACCTGTGTTGGCAAAAGAACTAAGCAAACTCTGCTTTGAGTTCAACGAGAAAGGCACAACGAAATTTGAATTCCACAAGGAGCATTTCTAA 2775 0.4685 MSGLPKHERRWASDTVPEKVTVSSGTSPGTEYSSFADDEYVEVTLDLQDDNTIVLRGVEPVTVLNIDDAAATSSGYATPASSVRSPTGRRSPSNRLRQFSQELKAEAFARARQFSQELRRFSWSHGGEAALAARDLRKQRAQLDRTRSGAGRALRGLRFISSKSNGVDAWNEVRSNFDKLAKDGFLHRTDFAQCIGMKDSKEFALELFDALSRRRRLKVEKISRDDLFEFWSQITDQSFDSRLQLFFDIVDKNEDGRIAEEEVKEIIELSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLSYSQALSYTSQALSQNLHGLRMRSPIRRMSRRLLYYLQENWKRLWVLTLWIATMTGLFTWKFIQYKQKDAFHIMGYCLLTAKGAAETLKLNMALILLPVCRNTITWLRSTKLAYVVPFDDNINFHKTIAAGIVIGIILHAGDHLACDFPRLVNTTEALYDKYLQGVFGKHKPSYGDLVKGPEGVTGILMVIFMAIAFTLATKLFRRNLIKLPKPFNRLTGFNAFWYSHHLFVIVYVLLIIHGVKLYLVTKWYHQTTWMYLAVPVLLYAGERTLRFFRSGLYTVHLKKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPDDDYLSVHIRQLGDWTQELKRVFSEACEPPVAGKSGLLRADETTKKSLPKLKIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLNSIVKMEELADSVSDSSRGSEHSAVNTDPASLNKISPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVADLDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKICSKHSNGRIGVFYCGAPVLAKELSKLCFEFNEKGTTKFEFHKEHF* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1560 924 Pfam FAD-binding domain 600 713 IPR013112 GO:0016491
Ahy5g1560 924 Pfam Ferric reductase NAD binding domain 720 906 IPR013121 GO:0016491
Ahy5g1560 924 MobiDBLite consensus disorder prediction 1 15 - -
Ahy5g1560 924 CDD NOX_Duox_like_FAD_NADP 605 866 - -
Ahy5g1560 924 PRINTS Cytochrome B-245 heavy chain signature 725 742 IPR000778 GO:0016020|GO:0016491
Ahy5g1560 924 PRINTS Cytochrome B-245 heavy chain signature 502 525 IPR000778 GO:0016020|GO:0016491
Ahy5g1560 924 PRINTS Cytochrome B-245 heavy chain signature 702 715 IPR000778 GO:0016020|GO:0016491
Ahy5g1560 924 SUPERFAMILY EF-hand 170 318 IPR011992 -
Ahy5g1560 924 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 718 924 IPR039261 -
Ahy5g1560 924 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 596 716 IPR017927 GO:0016491
Ahy5g1560 924 MobiDBLite consensus disorder prediction 1 33 - -
Ahy5g1560 924 Gene3D Translation factors 589 678 - -
Ahy5g1560 924 MobiDBLite consensus disorder prediction 74 94 - -
Ahy5g1560 924 SUPERFAMILY Riboflavin synthase domain-like 599 712 IPR017938 -
Ahy5g1560 924 Gene3D - 143 259 - -
Ahy5g1560 924 Gene3D - 711 924 IPR039261 -
Ahy5g1560 924 ProSitePatterns EF-hand calcium-binding domain. 251 263 IPR018247 -
Ahy5g1560 924 CDD EFh 221 267 IPR002048 GO:0005509
Ahy5g1560 924 Coils Coil 269 289 - -
Ahy5g1560 924 Pfam Ferric reductase like transmembrane component 401 557 IPR013130 -
Ahy5g1560 924 PANTHER RESPIRATORY BURST OXIDASE2 30 924 - -
Ahy5g1560 924 MobiDBLite consensus disorder prediction 17 33 - -
Ahy5g1560 924 Pfam Respiratory burst NADPH oxidase 142 241 IPR013623 GO:0004601|GO:0050664
Ahy5g1560 924 ProSiteProfiles EF-hand calcium-binding domain profile. 238 273 IPR002048 GO:0005509
Ahy5g1560 924 PANTHER NADPH OXIDASE 30 924 - -
Ahy5g1560 924 SFLD NADPH oxidase subgroup (NOX) 106 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1560 Ahy-Chr5 41319673 41327420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1560 9 924 Miscellaneous Gene Families AT1G64060 77.471 0.0 1511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1560 K13447 - gmx:100775988 1602.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1560 5 41319673 41327420 Ahy13g2777 13 107449135 107457498 PCT
Ahy5g1560 5 41319673 41327420 Ahy3g2445 3 105426507 105434405 PCT