Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2777 ATGAACGGTCATCCGAAGCACCAGCGCAGGTGGGCATCCGACACCGTTCCCGCCAGAGCAACCGTCAGTGCGGGAACTTCGCCGGGAACAGAGTCAACCTCCGCCGGCGGAGAAGAGTTTGTGGAGGTCACTCTCGATCTTCAAGACGATGACACTATCGTCCTTCGGAGCGTTGAACCAGCCACTGTCATTAACGTTGTTGTTGACAGTGGTACCACTGGTGGCAGTGGACACGAAACTCCGGCGTCTGTTTCTAGGTCGCCGACGATCCGGCGGACCTCGTCAAGAGGCTTGCGGCAGTTCTCGCAGGAGCTGAAGGCGGAGGCGGTTGCAAAGGCAAAGCAGTTCTCGCATGAGCTTAAGGCAGAGCTGCGACGGTTCTCGTGGAGCCGTTCGTCTTCGTCAGCTCAAAATGTTGGCGGAAGCAATGCCGGCGGCGGATTTGAGACGGCGCTGGCAGCTCGCGCTCTAAGAAAGCAGCGCGCTCAGCTAGATCGCACTCGTTCCGGTGCTCACAAAGCACTGCGCGGTCTGCGATTTATTAGCAGTAAATCAAATAATGGCGTTGATGCGTGGAACGAGGTGCAGAGCAACTTCAATAGGCTCGCCAAGGACGGTTATCTCCATCGCTCCGATTTTGCTCAGTGCATAGGAATGAGAGATTCCAAGGAATTCGCTCTGGAATTATTTGATGCTCTAAGCCGGAAGCGAAGGTTGACGGTTGAGAAGATAAGCAGGGATGAACTTTTTGAATATTGGACGCAAATTACCGATCAAAGCTTTGATTCGCGACTTCAGATCTTCTTCGACATGGTGGATAAAAACGAAGATGGAAGAATCGCCGAAGAAGAAGTAAAAGAGCTATGGCAATTGGAGACGCTTCTTTTGCAGAAGGACACGTACCTTAACTACAGCCAAGCTCTAAGCTACACAAGCCAAGCTTTGAGCCAGAACCTTCAGGGACTAAGGGCAAGAAGTCCTATTCGTAGGGCGAGCCGCAGGTTGGTCTACTATTTGCAAGAGAATTGGAGGAGACTTTGGCTCTTAACATTGTGGGTTTGCATAATGATTGGGCTGTTCACATGGAAGTTCTTTCAGTATAAGCAGAAAGATGCCTTTCAAATAATGGGTTACTGTCTTCTAACGGCCAAAGGTGCCGCTGAGACTTTAAAGTTCAACATGGCAATTATACTATTGCCCGTATGTAGAAATACCATTACTTGGCTTAGGTCTACCAAGCTGGCTTATGCTGTACCTTTTGACGACAACATTAACTTTCATAAGACAATTGCTGCGGCCATTGTGGTTGGTGTTATACTTCATGCCGGGGATCACCTTGCATGCGATTTTCCAAGACTTGTAAGAGCTTCTGAGGCTGATTACGAGAAGTATTTGAAGGGTGTATTTGGTGATCATAAACCCAGTTACCTAGACATTGTTAAAGGGATTGAGGGTGTGACTGGAATATTGATGGTGATTTTAATGTCAATAGCATTTACACTTGCAACTAAATGGTTCAGGAGAAATCTGATTAAGCTGCCTAAACCATTTAGTAGGCTTACTGGCTTTAATGCCTTCTGGTATTCACACCATCTGTTTGTCATTGTTTATGTCCTGCTCATCATCCATGGTATAAAGCTTTATCTTGTGCACAAATGGTACCTCAAAACGACATGGATGTATCTTTCAATTCCAGTTTTACTTTATGCGGCAGAAAGAACAATCAGATTCTTCCGTTCTGGTTTCTATACTGTCCGTCTTATAAAGGTCGCCATATATCCTGGAAATGTTCTAACATTGCAAATGTCTAAGCCTCCCCAGTTCCGATACAAGAGTGGACAATACATGTTTGTACAATGTCCCGCTGTTTCTCCGTTTGAATGGCATCCATTTTCTATTACCTCATCCCCTGGCGATGACTACCTGAGTGTTCACATTCGGCAATTGGGTGATTGGACACAGGAGCTTAAAAGGGTATTCGCTGAAGCATGTGAGCCCCCTGTATCCGGAAAAAGTGGCCTTCTCAGGGCTGATGAAACAACCAAGAAAAGTCTTCCAAAGCTAAAGATAGACGGACCTTATGGTGCGCCAGCTCAAGATTATAGAAAATACGATGTTTTGTTACTTGTCGGTCTCGGAATAGGAGCAACACCTTTCATCAGCATTCTGAAAGATCTTCTAAACAACATCATCAAAATGGAGGAGCAGGCGGATTCAGTCTCTGATATAAGTAGAGGTTCAGACCAAAGTGTTGGGAGTACAGATTCACCATCTCTAAACAAAATTGCTCCAAAACGGAAGAAAACATTGAAGACTACCAACGCTTATTTCTACTGGGTTACAAGAGAGCAAGGTTCTTTTGATTGGTTTAAAGGAGTCATGAATGAAGTAGCTGAACTTGATCAACGGGGTGTCATTGAGATGCACAATTACTTGACTAGTGTATACGAGGAAGGTGATGCAAGATCTGCCCTCATTACCATGGTGCAAGCACTCAACCATGCCAAAAACGGTGTTGATATCGTCTCAGGGACTAGGGTGCGAACCCATTTTGCTAGGCCTAACTGGAAGAAGGTATTCTCCAAAATGTGTTCCAAGCACTATGGCGGACGAATAGGGGTATTTTATTGCGGAGCACCAGTTTTGGCAAAAGAAATTAACAAGCTCTGCTTCGACTTCAATGAAAAAGGTCCAACAAAATTTGAGTTTCATAAGGAACACTTCTAA 2727 0.4565 MNGHPKHQRRWASDTVPARATVSAGTSPGTESTSAGGEEFVEVTLDLQDDDTIVLRSVEPATVINVVVDSGTTGGSGHETPASVSRSPTIRRTSSRGLRQFSQELKAEAVAKAKQFSHELKAELRRFSWSRSSSSAQNVGGSNAGGGFETALAARALRKQRAQLDRTRSGAHKALRGLRFISSKSNNGVDAWNEVQSNFNRLAKDGYLHRSDFAQCIGMRDSKEFALELFDALSRKRRLTVEKISRDELFEYWTQITDQSFDSRLQIFFDMVDKNEDGRIAEEEVKELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRARSPIRRASRRLVYYLQENWRRLWLLTLWVCIMIGLFTWKFFQYKQKDAFQIMGYCLLTAKGAAETLKFNMAIILLPVCRNTITWLRSTKLAYAVPFDDNINFHKTIAAAIVVGVILHAGDHLACDFPRLVRASEADYEKYLKGVFGDHKPSYLDIVKGIEGVTGILMVILMSIAFTLATKWFRRNLIKLPKPFSRLTGFNAFWYSHHLFVIVYVLLIIHGIKLYLVHKWYLKTTWMYLSIPVLLYAAERTIRFFRSGFYTVRLIKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSSPGDDYLSVHIRQLGDWTQELKRVFAEACEPPVSGKSGLLRADETTKKSLPKLKIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLNNIIKMEEQADSVSDISRGSDQSVGSTDSPSLNKIAPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKMCSKHYGGRIGVFYCGAPVLAKEINKLCFDFNEKGPTKFEFHKEHF* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2777 908 PANTHER RESPIRATORY BURST OXIDASE2 287 908 - -
Ahy13g2777 908 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 580 700 IPR017927 GO:0016491
Ahy13g2777 908 MobiDBLite consensus disorder prediction 1 37 - -
Ahy13g2777 908 Gene3D Translation factors 570 662 - -
Ahy13g2777 908 PRINTS Cytochrome B-245 heavy chain signature 486 509 IPR000778 GO:0016020|GO:0016491
Ahy13g2777 908 PRINTS Cytochrome B-245 heavy chain signature 709 726 IPR000778 GO:0016020|GO:0016491
Ahy13g2777 908 PRINTS Cytochrome B-245 heavy chain signature 686 699 IPR000778 GO:0016020|GO:0016491
Ahy13g2777 908 PANTHER NADPH OXIDASE 25 288 - -
Ahy13g2777 908 PANTHER NADPH OXIDASE 287 908 - -
Ahy13g2777 908 Pfam Respiratory burst NADPH oxidase 163 263 IPR013623 GO:0004601|GO:0050664
Ahy13g2777 908 Gene3D - 695 908 IPR039261 -
Ahy13g2777 908 ProSitePatterns EF-hand calcium-binding domain. 273 285 IPR018247 -
Ahy13g2777 908 MobiDBLite consensus disorder prediction 741 760 - -
Ahy13g2777 908 ProSiteProfiles EF-hand calcium-binding domain profile. 260 295 IPR002048 GO:0005509
Ahy13g2777 908 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 702 908 IPR039261 -
Ahy13g2777 908 SUPERFAMILY EF-hand 181 295 IPR011992 -
Ahy13g2777 908 Coils Coil 723 743 - -
Ahy13g2777 908 PANTHER RESPIRATORY BURST OXIDASE2 25 288 - -
Ahy13g2777 908 SUPERFAMILY Riboflavin synthase domain-like 583 696 IPR017938 -
Ahy13g2777 908 Gene3D - 164 281 - -
Ahy13g2777 908 MobiDBLite consensus disorder prediction 19 34 - -
Ahy13g2777 908 Pfam FAD-binding domain 583 697 IPR013112 GO:0016491
Ahy13g2777 908 MobiDBLite consensus disorder prediction 69 95 - -
Ahy13g2777 908 CDD EFh 243 290 IPR002048 GO:0005509
Ahy13g2777 908 Pfam Ferric reductase NAD binding domain 704 890 IPR013121 GO:0016491
Ahy13g2777 908 CDD NOX_Duox_like_FAD_NADP 587 850 - -
Ahy13g2777 908 SFLD NADPH oxidase subgroup (NOX) 108 908 - -
Ahy13g2777 908 Pfam Ferric reductase like transmembrane component 385 541 IPR013130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2777 Ahy-Chr13 107449135 107457498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2777 8 908 Miscellaneous Gene Families AT1G64060 74.789 0.0 1461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2777 K13447 - gmx:100801077 1578.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2777 13 107449135 107457498 Ahy13g2777 13 107449135 107457498 ECH
Ahy13g2777 13 107449135 107457498 Ahy3g2445 3 105426507 105434405 hybridization
Ahy5g1560 5 41319673 41327420 Ahy13g2777 13 107449135 107457498 PCT