Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1520 ATGGCTTCTCGCGTCAGCATCAACTTCCCTTCTTCTACTCCACCTTCCTCCCCTTATTTAAATCCCTTTCGTTCTTCTCATAACAACCTTCCTTCTAATAATACTCAGTCATTTTCTTCCCACTCTTCTTCGTCTCTCAACTCCTCTTTAACTACCTCTAATATGGCTCCTAAAACTGTCCTCGTTACCGGCGGTGCCGGTTACATCGGCAGCCACACCGTCCTTCAGCTCCTTCTCGGCGGCTTCAGGACCGTCGTTGTTGATAACTTGGATAATTCTTCCGAAGTTGCCATCCACAGAGTCAAGGAGCTCGCCGGTGAATTCGCTGGCAACCTCATCTTTCACCAGACTGACCTCAGAGACAGAGCTGCACTTGACCAAATATTTGCTTCCACAAAGTTTGATGCTGTGATACATTTTGCTGGACTGAAAGCAGTAGGTGAAAGTGTGCAGAAACCGTTACTGTATTATAACAACAACTTGATTGGGACCATCACTCTGTTGGAAGTGATGGCTGCTCATGGATGCAAGAAGCTTGTGTTCTCATCTTCGGCCACCGTATATGGTTGGCCAAAGGAGGTTCCATGTACGGAAGAGTTCCCTCTGTCAGCAATGAATCCATATGGACGAACTAAGGTTCGTGATTACATTCATGTTGTCGATTTAGCAGACGGGCACATTGCCGCATTGCTTAAACTGGATGAACCTAATATAGGCTGTGAGGTTTATAACTTGGGCACTGGAAAGGGGACATCAGTGCTGGAGATGGTTAAAGCTTTTGAAAAAGCCTCTGGAAAGAAAATTCCACTTGTGATGGCTGGCCGAAGAGCTGGGGATGCTGAAATTGTTTATGCATCAACAGAGAAAGCAGAAAGAGAACTTAAGTGGAAGGCAAAATACGGCATTGAGGAGATGTGCCGTGACCAATGGAATTGGGCTAGCAAAAACCCTTATGGCTATGGATCTGAAGATTCTAAAGACTCTACTGATTAG 993 0.4562 MASRVSINFPSSTPPSSPYLNPFRSSHNNLPSNNTQSFSSHSSSSLNSSLTTSNMAPKTVLVTGGAGYIGSHTVLQLLLGGFRTVVVDNLDNSSEVAIHRVKELAGEFAGNLIFHQTDLRDRAALDQIFASTKFDAVIHFAGLKAVGESVQKPLLYYNNNLIGTITLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAMNPYGRTKVRDYIHVVDLADGHIAALLKLDEPNIGCEVYNLGTGKGTSVLEMVKAFEKASGKKIPLVMAGRRAGDAEIVYASTEKAERELKWKAKYGIEEMCRDQWNWASKNPYGYGSEDSKDSTD* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1520 330 Gene3D - 34 223 - -
Ahy5g1520 330 CDD UDP_G4E_1_SDR_e 59 312 IPR005886 GO:0003978|GO:0006012
Ahy5g1520 330 Gene3D - 224 330 - -
Ahy5g1520 330 PANTHER UDP-GLUCOSE 4-EPIMERASE 58 212 - -
Ahy5g1520 330 PANTHER UDP-GLUCOSE 4-EPIMERASE 211 324 - -
Ahy5g1520 330 Pfam GDP-mannose 4,6 dehydratase 61 221 IPR016040 -
Ahy5g1520 330 PANTHER UDP-GLUCOSE 4-EPIMERASE 2-LIKE 58 212 - -
Ahy5g1520 330 PANTHER UDP-GLUCOSE 4-EPIMERASE 2-LIKE 211 324 - -
Ahy5g1520 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 55 319 IPR036291 -
Ahy5g1520 330 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1520 Ahy-Chr5 40319143 40323242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1520 13 199 Miscellaneous Gene Families AT4G12250 29.897 2.55e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1520 K01784 - thj:104817634 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1520 5 40319143 40323242 Ahy13g2687 13 100029050 100032504 PCT
Ahy5g1520 5 40319143 40323242 Ahy3g2376 3 98120494 98123823 PCT