Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2376 ATGGCCGCCAAAACCATCCTCGTCACCGGTGGAGCGGGCTACATCGGCAGCCACACCGTTCTCCAGCTCCTCAATGGCGGTTTCAAGGCCGTCATCGTCGACAACTACGACAATTCTTCCGAAATCGCCGTCGAGAGGGTCAAGGGACTAGCTGGACAATTCGCCTCCAACCTCTCATGCCATAAGTTAGACCTCCGGGACAGAGAAAGACTTGAGAAAATTTTTGCTTCCACAAAGTTTGATGCTGTGATACATTTTGCTGGACTGAAAGCAGTAGGTGAAAGTGTGGAGAAACCACTGTACTACTTTAATAACAACTTGATTGGGACAATTGTGCTACTTGAAGTCATGGCTGCCCATGGATGCAAGAAGCTTGTGTTCTCATCTTCAGCCACTGTATATGGTTGGCCAAAGCAGGTCCCATGTACAGAAGAGTTCCCTTTGTCAGCAGCAAATCCATATGGACGAACCAAGCTTATGATCGAAGAAATTTGCCGTGATCTCTACCAATCAGATCATGGATGGAAAATAATATTGTTGAGATACTTCAACCCAGTGGGTGCACATCCTAGTGGAAATATTGGTGAGGATCCTCGTGGAATTCCAAACAATCTCATGCCATTTGTTCAGCAAGTAGCTGTCGGCAGACGCCCTGCACTGACAATTTTTGGAACTGACTATAAAACAAGCGATGGCACTGGAGTTCGCGATTACATTCATGTTGTTGATTTAGCAGATGGCCACATAGCTGCATTGAATAAACTAGAGGATCCTAAAATAGGTTGTGAAGTTTATAACTTGGGAACTGGAAAGGGGACGTCAGTTTTGGAGATGGTCAAAGCTTTTGAAAATGCCTCTGGAAAGAAAATTCCACTTAAAATGGCTGATCGGAGACCTGGTGATGCTGAAATCGTTTATGCATCAACAGATAAAGCATCAAAAGAACTCAATTGGAAGGCAAAATATGGCATTGACGAGATGTGCCGTGATCAATGGAATTGGGCTAGCAAAAATCCTTATGGATACGGATCTGCAGACTCTAAGAATTGA 1050 0.4457 MAAKTILVTGGAGYIGSHTVLQLLNGGFKAVIVDNYDNSSEIAVERVKGLAGQFASNLSCHKLDLRDRERLEKIFASTKFDAVIHFAGLKAVGESVEKPLYYFNNNLIGTIVLLEVMAAHGCKKLVFSSSATVYGWPKQVPCTEEFPLSAANPYGRTKLMIEEICRDLYQSDHGWKIILLRYFNPVGAHPSGNIGEDPRGIPNNLMPFVQQVAVGRRPALTIFGTDYKTSDGTGVRDYIHVVDLADGHIAALNKLEDPKIGCEVYNLGTGKGTSVLEMVKAFENASGKKIPLKMADRRPGDAEIVYASTDKASKELNWKAKYGIDEMCRDQWNWASKNPYGYGSADSKN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2376 349 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
Ahy3g2376 349 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Ahy3g2376 349 PANTHER UDP-GLUCOSE 4-EPIMERASE 1 346 - -
Ahy3g2376 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 341 IPR036291 -
Ahy3g2376 349 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 1 346 - -
Ahy3g2376 349 Gene3D - 6 275 - -
Ahy3g2376 349 Gene3D - 194 335 - -
Ahy3g2376 349 TIGRFAM galE: UDP-glucose 4-epimerase GalE 6 340 IPR005886 GO:0003978|GO:0006012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2376 Ahy-Chr3 98120494 98123823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2376 5 319 Miscellaneous Gene Families AT4G00110 28.097 9.50e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2376 K01784 - zju:107429837 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2687 13 100029050 100032504 Ahy3g2376 3 98120494 98123823 hybridization
Ahy5g1520 5 40319143 40323242 Ahy3g2376 3 98120494 98123823 PCT