Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2233 ATGAAAGATGGGATGGGATTGGGAACGAAGGTGTCGTTTGGTGTGATCGGAGTGAGTTTTGTGATATTGGTTGTGGTGAAGATGTCGGAGTTGTTGAATAAGGCGAAGAACTATGTGAACGATAAAGTGGCCAACATGCCGAAGCCCGAGGCCAGTGTGGCTGACGTGGATTTCATGCGCGTCGGGAAGGATGGCGTCGAGTACCTTGCCAAGGTTAATGTTTCCAATCCCTATTCTACCCCTCTTCCCATTTGTGAGATCAAGTACTCTCTCAAGAGTGATGGCAGAGAGATAGCATCAGGTGTAATACCAGACCCTGGTTCATTGAAGGCAAATGGGACAACATTGCTTGATGTCCCAGTTAAGGTTGCTCACAGCATATTAGTGAACTTGATTAGGGACATTGGTAGGGATTGGGACATTGATTACCAATTGGACCTTGGCTTAGTCATTGATATTCCTTGTGTTGGTAACATCACCATTCCTGTTTCTCAGAAGGGAGAGATTAAGCTTCCAACCCTCAAGGACATGTTTACTGGTGGCTCTAAGAATACTGATCCTGCTCCTGCTCCTGCTACTACCTAA 585 0.4615 MKDGMGLGTKVSFGVIGVSFVILVVVKMSELLNKAKNYVNDKVANMPKPEASVADVDFMRVGKDGVEYLAKVNVSNPYSTPLPICEIKYSLKSDGREIASGVIPDPGSLKANGTTLLDVPVKVAHSILVNLIRDIGRDWDIDYQLDLGLVIDIPCVGNITIPVSQKGEIKLPTLKDMFTGGSKNTDPAPAPATT* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2233 194 Pfam Late embryogenesis abundant protein 71 167 IPR004864 -
Ahy4g2233 194 Gene3D - 44 178 - -
Ahy4g2233 194 SMART why 51 168 IPR013990 GO:0009269
Ahy4g2233 194 SUPERFAMILY LEA14-like 30 177 - -
Ahy4g2233 194 PANTHER DESICCATION-RELATED PROTEIN LEA14-RELATED 19 186 - -
Ahy4g2233 194 PANTHER - 19 186 IPR045043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2233 Ahy-Chr4 118543975 118546524 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2233 - - gmx:547837 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2543 14 132252168 132254927 Ahy4g2233 4 118543975 118546524 hybridization
Ahy4g2233 4 118543975 118546524 Ahy12g0189 12 3122205 3124101 PCT
Ahy4g2233 4 118543975 118546524 Ahy2g0217 2 2500047 2501772 PCT
Ahy12g0189 12 3122205 3124101 Ahy4g2233 4 118543975 118546524 PCT
Ahy2g0217 2 2500047 2501772 Ahy4g2233 4 118543975 118546524 PCT