Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0189 ATGGCTCAGTTATTGGATAAAGCGAAGAACTTTGCAGCGGAGAAGATGAGTGATGTGGCGAAGCCTGAGGCGCATGTAACTGACGTGGACTTCAAGCGCGTGAGCAAGGATCACATTGAGTATTTGGCCAAAGTCTCTGTTCAGAATCCTTACTCTGCTTCTATCCCTATTTGTGAGATCAAATACTCTTTCAAAAGTGCTTCAAGGGAGATAGCAACAGGGAGAATACCAGACCCAGGATCACTGAAGGGTAAAGACACAACAATGGTGGATGTGCCAGTGAAGGTACCTTACAATGTATTGATGAGCTTAGCCAAGGACGTTGGTGCTGATTGGGACATAGATTACCAATTGGACATTGGTCTTGTTATTGATCTTCCAGTCATTGGAAACTTCACTATTCCTCTCTCTCACAATGGAGAGGTCAAGCTTCCATCCCTCACTAGCATGTTCAGCAAAGAAAATTAA 468 0.4402 MAQLLDKAKNFAAEKMSDVAKPEAHVTDVDFKRVSKDHIEYLAKVSVQNPYSASIPICEIKYSFKSASREIATGRIPDPGSLKGKDTTMVDVPVKVPYNVLMSLAKDVGADWDIDYQLDIGLVIDLPVIGNFTIPLSHNGEVKLPSLTSMFSKEN* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0189 155 SUPERFAMILY LEA14-like 1 150 - -
Ahy12g0189 155 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Ahy12g0189 155 SMART why 24 141 IPR013990 GO:0009269
Ahy12g0189 155 PANTHER DESICCATION PROTECTANT PROTEIN LEA14 1 152 - -
Ahy12g0189 155 Gene3D - 17 151 - -
Ahy12g0189 155 PANTHER - 1 152 IPR045043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0189 Ahy-Chr12 3122205 3124101 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0189 - - adu:107472778 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0189 12 3122205 3124101 Ahy2g0217 2 2500047 2501772 hybridization
Ahy14g2543 14 132252168 132254927 Ahy12g0189 12 3122205 3124101 PCT
Ahy4g2233 4 118543975 118546524 Ahy12g0189 12 3122205 3124101 PCT
Ahy12g0189 12 3122205 3124101 Ahy14g2543 14 132252168 132254927 PCT
Ahy12g0189 12 3122205 3124101 Ahy4g2233 4 118543975 118546524 PCT