Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2196 ATGGCTTTCAATTTGATTCTATGGTATCATCCCAATTTGGTTCTTATTGTTTTTGTGCTCTTTTCATGCTCCTTTTGTGTGTTCTCTTCAACTGATGAAGCTGGTGGCAGTGGCGAAACCTTTACTGTTTCGAGCTTCAGCTACCCTGAGACTAGGCTCAGACCCTTTGATTTGCGTTATATCAGAGTTGACTTGCCGCCATGGTTCTCTGTGCTGTCTATAGCATTGAACTCAAACGTAGACCTTGATATCTCAAGAATTGAAACGGCTCCACAGAGTATGTTGCCGATCATATGCTTTAGAGATGGAAGTCCTCCACTGCCAGATGCCTTAAACATATCAATGACGAATTCAGCAATCTCAGGGATAAATGGTCTTGATGTAGAGCAGTGTTTTCCAATGCAGAAAAATATCACTATGACATTGACAAACAATCAGATATCTCCAGGTGTTTGGTACATTGGCCTTTTCAATGGCATTGGACCTACAAGGACACAGTCAAAGATGATTATCCGAGGTCCGGCATACTCCTTCATTGCTAATATCAGCGTGGAAGCATGCGCAAATTCAATGATGAGGGGGAATTTCTGTAACAGTACAGTATATCCACTCTCATGCACATCTTCCGGTAACTATAATGCTTTGGCGGTTATGGCGAACACGGCAGTAATGGAGAATGTTGTGACCTGCAGGAGTAGTTTTAAAATGTTTTGTGGTCATGAAGGTGTACCAAACTTCTTCTCCTTGGATATAATGAATGTGGCAGAAGAACTTACCTTTACAGTTAAAGATGTCAGATTCAACACTACCTCTTTGAATAGCAGTTCTGCTGCAAATGATGTTCATTTAATGTGTTTTATTCGACACGGTGCAATGCCTTCGGCAACTTTGTATGATTATACCAGTGATTTAAATAAAGTTCCATTGGTTATACATTCTCCACTAATTGGTCGTTGGTACATTAGTATAGTACCTGTCAATCTTACGACAACTCGGGACAGCAATGCTGGAGTTTGCTATTCAATGGTGTCGCATCTGCTTCAATGCCCTTTTGGGAAAGGTGGGCCAAATTGTACAATGAATAGCTACATGCTCCAGACATTTGTAAGGAGAGGTCCAACCCCGTTTGAATCGTACTACTTACCGGTCAGTGGCGGAGCATCACATGATTCGGCAAACTTTCCTCTCGAGCCACTTTTAAGCAACTCATCATACAATGGACAACCAGATAACATTTGGACTTTCTTTCTTTTGGACATACCTCGCGGTGGAGCCGGAGGAAATATTCATGTTCAGCTTTCCTCGGATGTCAAGATCAATTATGAAATATATGCTCGATTTGGTGGATTGCCGTCGCTTGTTAGCTGGGATTATTATTATGTGAACAAGACAAGGAGAAGTGATCCATCCATGTTTTTCAAGCTCTATGATTCAAGGGATGACAAGGCTGATTTTTATATTATGTATGCTAGAGAAGGAACTTGGGGATTTGGTCTAAGACATGTTAATACCAGCAATGATTCTTTAAAGGGGCCAACTATCATGTCAATTGCGCTTGAACGGTGCCCAAAACGTTGTTCCTCCCACGGCGAATGTAAATTTTCTTTCGATGCTAGCGGATTGACATCATACAGCTTCTGCTCTTGTGATCGAAACCATGGAGGCTTTGACTGTAGCATTGAAATTGTAACTCATCAAGGACATGTTCGACAATCAATTTTTCTCATTGTATCGAATGCTGCAGCCATACTTCCTGCCTATTGGGCCCTTAGGAAGAAGGCATTAGCAGAATGGGTTTTATTCACATCCAGTGGAATTTCAAGTGGACTATATCATGCATGTGATGTTGGTACCTGGTGTGCATTAAGCTATAATGTCCTACAGTTCATGGACTTTTGGCTCTCCTTCATGGCTGTGATTAGCACTTTTCTTTATCTTGCTACCATTGATGAAGTATTTAAGAGAGCAATCCACACAGTTATTGCTATCCTTACAGCCCTATTGGCAGCAACAAAAGCAACCAGGTCTTCCAATATTCTTCTTGTTATTGTGATTGGTGCTCTTGGTCTTCTTATTGGATGGTTGATAGAGATCTCAACAAAATATAGATCCCTTTCAATTCCAGTTAGATTCCCATTGAATTTACATCTCAGTTTTCAAACAATAAAGACATGGATCATTAGTCTTGTCAGGACACTTCTGAGACGGTACAATTTGGCGTATGCTATGGCCGGTTTTGCTGCATTGGCCATGGCAGCAGTAAGCTGGACACTCGAAACTAGTGAAAACTACTGGTTCTGGCATAGCTTTTGGCATATTACAATATATACATCTTCTTTCTTCTTCCTTTGTTCAAAGGCAAATATTGAGAATCATCTACCAGCAAATGGAAACTATGAACTGACTCATCAGAATTCGCTTCCAAGAAGTGGTTAG 2436 0.4093 MAFNLILWYHPNLVLIVFVLFSCSFCVFSSTDEAGGSGETFTVSSFSYPETRLRPFDLRYIRVDLPPWFSVLSIALNSNVDLDISRIETAPQSMLPIICFRDGSPPLPDALNISMTNSAISGINGLDVEQCFPMQKNITMTLTNNQISPGVWYIGLFNGIGPTRTQSKMIIRGPAYSFIANISVEACANSMMRGNFCNSTVYPLSCTSSGNYNALAVMANTAVMENVVTCRSSFKMFCGHEGVPNFFSLDIMNVAEELTFTVKDVRFNTTSLNSSSAANDVHLMCFIRHGAMPSATLYDYTSDLNKVPLVIHSPLIGRWYISIVPVNLTTTRDSNAGVCYSMVSHLLQCPFGKGGPNCTMNSYMLQTFVRRGPTPFESYYLPVSGGASHDSANFPLEPLLSNSSYNGQPDNIWTFFLLDIPRGGAGGNIHVQLSSDVKINYEIYARFGGLPSLVSWDYYYVNKTRRSDPSMFFKLYDSRDDKADFYIMYAREGTWGFGLRHVNTSNDSLKGPTIMSIALERCPKRCSSHGECKFSFDASGLTSYSFCSCDRNHGGFDCSIEIVTHQGHVRQSIFLIVSNAAAILPAYWALRKKALAEWVLFTSSGISSGLYHACDVGTWCALSYNVLQFMDFWLSFMAVISTFLYLATIDEVFKRAIHTVIAILTALLAATKATRSSNILLVIVIGALGLLIGWLIEISTKYRSLSIPVRFPLNLHLSFQTIKTWIISLVRTLLRRYNLAYAMAGFAALAMAAVSWTLETSENYWFWHSFWHITIYTSSFFFLCSKANIENHLPANGNYELTHQNSLPRSG* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2196 811 ProSitePatterns EGF-like domain signature 1. 547 558 IPR000742 -
Ahy4g2196 811 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 14 810 - -
Ahy4g2196 811 Pfam Protein of unknown function (DUF3522) 568 773 IPR021910 GO:0016021
Ahy4g2196 811 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 14 810 IPR021910 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2196 Ahy-Chr4 117430995 117437927 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2196 - - gmx:100787532 1300.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2484 14 130188261 130195213 Ahy4g2196 4 117430995 117437927 hybridization
Ahy4g2196 4 117430995 117437927 Ahy12g0092 12 1915123 1921632 PCT
Ahy4g2196 4 117430995 117437927 Ahy2g0142 2 1580932 1587411 PCT
Ahy12g0092 12 1915123 1921632 Ahy4g2196 4 117430995 117437927 PCT
Ahy2g0142 2 1580932 1587411 Ahy4g2196 4 117430995 117437927 PCT