Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0092 ATGTCTTTCAATTCGATTCTGTGGTGTCATCCAAAACTGATTCTTCTCACTGTTTTGTTACTGTTTGGTTCTTCTCTCTGCACTTCTGCAAGTGAAGGTGAACTTGTTGGAACAACGGTTTCTGGTGGCAACTTCTTCACCGTTTCCAGCTTCAGCTACCCTGAGACGACTATCAAGCCCTTTGATTTGCGCTATATCCGAGTTGATATACCGCCATCGTTTTCTGCTGTGTCCATAGCATTGAATTCAGATGTAGATCTTGATCTTTCAAGGGTCGATCGAATTCCAAAAAGCTCACTGCCAATAATATGTTTCAGAGATGGCAGCCCTCCTCTGCCAGATGCCTTAAACACAACTCTGAAAGATTCAGTTGTCTCAGGAATAAATGATCTTGATGTGGAGCAGTGTTTTCCTATGCAGAAGAATATCACTATGAGATTGACAAATGAACAGATATCTGCAGGCGCTTGGTACATTGGTCTATTCAATGGCATTGGAGCGACAAGAACACAATCAAAGATGATTAACCGAGGCTCATCATACTCCTTCATTGCTAATATAAGTGTGGAAGCATGCACGAATTCGATGATGAAGGGGGTGTTCTGTAACAGTACAGTCTATCCACTTTCATGCACATCGTCCAATGTCTTTAAATATTATGATTTGGATGCTACAGAGGTGAAGAAGCCGATGATGGAAAATGCTCTGACCTGCAAAAATAACTTCGAAACTTCGTGTGTTCAGGAAGGCGTACCACAGTTCTATTCCTTGGATATAACAAATATGGCAGAAGAATTGACCATTACAGCAGCAAATGTCAAATTCAACTCTACATCTTCAAATAGCACTTCTAGTGCAGATGATTTTAAGTTAATGTGTTATGCTCGCCATGGTGCAATTCCTTCAGAGACTTCGCATGATTATTCCAGTGATTTGAGTAAATCCCCTCTTGTTATTCGTGCTCCACAGATTGGTCGTCTATACATTAGTATATTACCGGTTAATCTGGCAAAAACGTTAGATGGAACTCAGGATGGCAATGCCAAAGTTTGCTATTCAATGGAAACACAAGTGGTTCAGTGCCCTCTTGGTAAAGCTGGACCGAATTGCACAATGGATAGCTATACACTTCAGACAGTCCTAAGTAGAATTCCAATGCCGTTCGAATCATATTATTTACCAGTTGGTGAGGTAGAAATGGCAGAGTCGGCAAATTTTCCTCTTGAGCCACTTTCAAACAACACAATGAACCAAGGAGAAACTGATAACATTTGGACTTACTTTATTTTGGACATTCCTCGTGGTGCAGCTGGACGAAATATTCATGTACGGCTATCCTCAGATGTGAAGATTAATTATGAATTTTATGCTCGATTTGGTGGATTACCTTCTCTTGAGAGTTGGGACTATTATTATGCTAACAAGACAAGGAAGAGCGACGAATCGGCGTTTTTCATGCTATATAGTTCAAAAGATGACAATGTTGATTTTTACATTATTTATGCTAGAGAAGGAACATGGGGTTTTGGTTTAAGACATCTTAATGCAAGCGGCAATTCTTTGAAAGCACAAACTGCCATGTCTATTTCACTTGAAGGATGCCCGAAACATTGCTCGTCTCATGGTGACTGTAGATATTCTTTTGATGCTAGCGGATTGACATCGTATAGCTTCTGCTCTTGTGATCGGAACCACGGGGGCTTTGACTGTAGCGTTGAAATTGTATCGCATAAAGGGCACATAGTGCAATCGATTTTTCTCATTGCATCGAATGCAGCAGCAATGCTTCCTGCCTATTGGGCCCTTCGGCAGAAGGCATACGCAGAATGGATTTTGTTCACTTCGAGTGGAATTTCGAGTGCGATTTATCATGCATGTGATGTAGGCACTTGGTGTCCCTTGACCTATAATGTTCTTCAGTTCATGGACTTTTGGCTTTCTTTCATGGCCGTGGTTAGCACTTTCGTGTACTTAGCCTCGATCAATGAAACACATAAGAGGGCAATCCACACAGCTGTTGCTATCTTTACTGCACTCATGGCTGCAACCAAGGCAACCAGATCTTCGAATATTGTTCTTGTGTTTGTGCTTGGAGCTATTGGTCTTCTAATCGGTTGGTTGATAGAGGTCTCATCAAAGTATAGGTCCCTTTCATTTTCATTCAGATTCTCACCAAGTTTCCCTCAAAGCTTGTTAACTATAAAGGATTGGCTCTATAAGCTTGTCATGTCGCTTTGGAGGCGGTTCCATTGGGGTTTTGCATTGGCCGGTTTCATCGCGTTAGCCATGGCAGCAACAAGCTGGGTACTTGAAACCAGTTCAACCTACTGGATATGGCATAGCTTTTGGCATGTCACAATATACACATCATCTTTCTTCTTTCTTTGCTCAAAAGCAAGTAATGTGGATGCAGAGGAGGATCAGCTACCTACGACGGAAAACTATGCGCTTACTCGCCAAGACTCGTTTTCGAGAAGCGAGTCTTAA 2487 0.4174 MSFNSILWCHPKLILLTVLLLFGSSLCTSASEGELVGTTVSGGNFFTVSSFSYPETTIKPFDLRYIRVDIPPSFSAVSIALNSDVDLDLSRVDRIPKSSLPIICFRDGSPPLPDALNTTLKDSVVSGINDLDVEQCFPMQKNITMRLTNEQISAGAWYIGLFNGIGATRTQSKMINRGSSYSFIANISVEACTNSMMKGVFCNSTVYPLSCTSSNVFKYYDLDATEVKKPMMENALTCKNNFETSCVQEGVPQFYSLDITNMAEELTITAANVKFNSTSSNSTSSADDFKLMCYARHGAIPSETSHDYSSDLSKSPLVIRAPQIGRLYISILPVNLAKTLDGTQDGNAKVCYSMETQVVQCPLGKAGPNCTMDSYTLQTVLSRIPMPFESYYLPVGEVEMAESANFPLEPLSNNTMNQGETDNIWTYFILDIPRGAAGRNIHVRLSSDVKINYEFYARFGGLPSLESWDYYYANKTRKSDESAFFMLYSSKDDNVDFYIIYAREGTWGFGLRHLNASGNSLKAQTAMSISLEGCPKHCSSHGDCRYSFDASGLTSYSFCSCDRNHGGFDCSVEIVSHKGHIVQSIFLIASNAAAMLPAYWALRQKAYAEWILFTSSGISSAIYHACDVGTWCPLTYNVLQFMDFWLSFMAVVSTFVYLASINETHKRAIHTAVAIFTALMAATKATRSSNIVLVFVLGAIGLLIGWLIEVSSKYRSLSFSFRFSPSFPQSLLTIKDWLYKLVMSLWRRFHWGFALAGFIALAMAATSWVLETSSTYWIWHSFWHVTIYTSSFFFLCSKASNVDAEEDQLPTTENYALTRQDSFSRSES* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0092 828 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 15 827 - -
Ahy12g0092 828 Pfam Protein of unknown function (DUF3522) 580 785 IPR021910 GO:0016021
Ahy12g0092 828 ProSitePatterns EGF-like domain signature 1. 559 570 IPR000742 -
Ahy12g0092 828 Gene3D - 476 574 - -
Ahy12g0092 828 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 15 827 IPR021910 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0092 Ahy-Chr12 1915123 1921632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0092 - - gmx:100777848 1254.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0092 12 1915123 1921632 Ahy2g0142 2 1580932 1587411 hybridization
Ahy14g2484 14 130188261 130195213 Ahy12g0092 12 1915123 1921632 PCT
Ahy4g2196 4 117430995 117437927 Ahy12g0092 12 1915123 1921632 PCT
Ahy12g0092 12 1915123 1921632 Ahy14g2484 14 130188261 130195213 PCT
Ahy12g0092 12 1915123 1921632 Ahy4g2196 4 117430995 117437927 PCT