Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2167 ATGCAGGTGTTCGTTAATTTGATCACAAATTCTTGTGCTAAGAATATGGAGAAGAAATCATCATCATCAACAAAGTTTGATGAGATTTCTGAGTTAGGATTTCAACCTCCTCCTCCTTCTCCTTCTATGGAGGATCATTCGGCAACCGATGCATGGACATATTCAGAGCCAGAGGCATCAAACTTATCAGATTCAGTTGATGAAAGCAGTTATGCCAGTGACCTTTCGCCTTCTCGGCCGACGGCTGCGAAAGCAGATGCTAAACAAGGTGTTCTTTCAAGGCTAGGATTGAAGTTGCGCAAGAATTCGGTCGATGTTAAGCTCAATGAGAGTGATCTTATGGATTCAGGTGAGCTTGAAGTAATGAAGGAAAGATTTTCAAAGCTTCTGTTGGGAGAAGACATGTCTGGTGGTGGAAAAGGAGTTTGCACTGCAGTTACAATTTCAAATGCTATTACCAATCTCTACGCAACTGTATTTGGACAAAGTTTGAAGTTGGAGCCACTGAAGCCTGAGAAGAAAGCAATGTGGAAAAGAGAAATGAAGGTTCTTTTATCAGTGTGTGATTATATAGTAGAATTTGCCCCAACTGCACAATATTTAGAAGATGGAACAATCGTTGAGATGATGAAGAGTAGACCAAGATCAGACATATATATCAACCTCCCTGCTCTGCAGAAGCTTGACACAATGCTCATAGAAATATTAGACACTTTCCATGATACTGAATTTTGGTATGTAGATAACATTCCGGCGAATTCACCACGCACGCGCGCAACCTCTTTTCGGAGGATTGTTCAGCGAAAAGACGAGAAATGGTGGCTTCCGGTGCCTTGTGTTCTCCCCGGTGGCCTATCTGAAAAATCAAGGAAGCACTTGGTAGAAAAAAGGGATTGTGCTAACCAAATTCATAAAGCAGCCATGGCAATAAACAACAATGTTCTTGCTGAGATTGATATCCCAGAAACCTACATTGATAATCTTCCTAAGCTGAAATTCTATAGCCAAGTGGTTGAGGATCCAATTACATGTGACCCCCTAAAGTCTTGGAATTTATCATCAAATTTCATAAGCCTTTTATGGAAGCCAATGATAGCAGCTGAGACTTGTAGAAAAAGGGATGATATAATTTCACATAAGAATGGAAGAGCAAATATGGGAGACACAATTTACCACTACATGTCTGCTGCAGAGAAATTCTCAGCTGATCAACTTCTTGACTACTTGAAGATAAGTTCTGAGCATGAAGCACTTGAGCTGGCCGACAGGGTCGAGTCTTCGATGTACTCGTGGCGCCGGAAAGCTTGCCTGAGCCATTCCAAATCATCCTGGAGCAAAGTGAAGGAACTCATGGCCGACGGCGACCGGAAGGACAAGAATTACACCTTAGCTGAGAGAGCAGAGACTTTGTTGTTCTGCCTGAAGCAAAGATATCCTGAACTGTCACAAACTTCTCTTGACACATGCAAGATTCAGTATAACAAGGATGTTGGAAAAGCAATACTAGAGAGTTATTCAAGAGTACTAGAAGGCCTAGCATTCAACATTGTTGCTTGGGTTGAAGATGTTCTCTATGTAGATAAATCAATGAAGAACAGAGAAGTCTAG 1608 0.416 MQVFVNLITNSCAKNMEKKSSSSTKFDEISELGFQPPPPSPSMEDHSATDAWTYSEPEASNLSDSVDESSYASDLSPSRPTAAKADAKQGVLSRLGLKLRKNSVDVKLNESDLMDSGELEVMKERFSKLLLGEDMSGGGKGVCTAVTISNAITNLYATVFGQSLKLEPLKPEKKAMWKREMKVLLSVCDYIVEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLIEILDTFHDTEFWYVDNIPANSPRTRATSFRRIVQRKDEKWWLPVPCVLPGGLSEKSRKHLVEKRDCANQIHKAAMAINNNVLAEIDIPETYIDNLPKLKFYSQVVEDPITCDPLKSWNLSSNFISLLWKPMIAAETCRKRDDIISHKNGRANMGDTIYHYMSAAEKFSADQLLDYLKISSEHEALELADRVESSMYSWRRKACLSHSKSSWSKVKELMADGDRKDKNYTLAERAETLLFCLKQRYPELSQTSLDTCKIQYNKDVGKAILESYSRVLEGLAFNIVAWVEDVLYVDKSMKNREV* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2167 535 MobiDBLite consensus disorder prediction 46 77 - -
Ahy4g2167 535 Gene3D PRONE domain, subdomain 1 111 345 - -
Ahy4g2167 535 ProSiteProfiles PRONE domain profile. 109 535 IPR005512 GO:0005085
Ahy4g2167 535 Gene3D PRONE domain, subdomain 2 375 493 - -
Ahy4g2167 535 MobiDBLite consensus disorder prediction 16 87 - -
Ahy4g2167 535 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 22 535 - -
Ahy4g2167 535 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 379 531 IPR005512 GO:0005085
Ahy4g2167 535 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 118 331 IPR005512 GO:0005085
Ahy4g2167 535 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 22 535 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2167 Ahy-Chr4 116751366 116758152 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2167 - - adu:107485793 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2432 14 128831536 128835733 Ahy4g2167 4 116751366 116758152 hybridization
Ahy4g2167 4 116751366 116758152 Ahy12g0057 12 1561956 1565560 PCT
Ahy4g2167 4 116751366 116758152 Ahy2g0019 2 191669 195168 PCT
Ahy12g0057 12 1561956 1565560 Ahy4g2167 4 116751366 116758152 PCT
Ahy2g0019 2 191669 195168 Ahy4g2167 4 116751366 116758152 PCT