Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0057 ATGGAAAATTCATCAAATTTTGATGAAAGTTCTGATTTGGGGTATCAGCAATCAACTTCTTCTATGGATCAAAATGATCAAAGTACTGAATACTCTCCATTCAGTGGTGATTCATTTGCATATTGTAGGAGTAACTCAGAGGCCTCAAACTTGTCATCATTAGAGCCTGTTGATGACAATCATAGTTTTGCTAGTAGTGATCTTCAACCTTCGCCGCCTTCTCGGTGGATTGCCGCCGCCACCATGAGAACCGAGTCTAGTCATCATCATGGAGCTGCTCTTTCAAGTCTTGGAGGAATGAAGAAGAGGATGCATTCACTAGATAGTAAATCTGATGATCTTGATCTGCTGGAGTCAGAGCTTGAAATGATGAAGGAAAGATTTGCAAAGCTTCTATTGGGGGAAGACATGTCTGGTGGTGGAAAAGGTGTATGCACTGCAGTTACAATCTCAAACTCCATTACTAACCTTTATGCAACTGTTTTTGGACAAAACCTGAAGTTGGAGCCTCTGAAGGCTGAGAAGAAGGCCATGTGGAAAAGAGAAATGAATTGTCTTCTATCTCTCTGTGATTACATTGTTGAATTTGCTCCAACTGCACAATGCTTAGATGATGGCACAATTGTAGAGATGATGACAAGCAGACCAAGATCAGATATTTATATCAACCTTCCAGCTTTACAGAAACTTGACACATTGCTTATGGAAATATTGGATAGTTTCAAGGATACTGAATTTTGGTATGCGGAACAAGGGAGTATGTCGGGGAATTCGTCTCGGTCACGTGCCGGATCGTTTCGAAGGGTGGTTGTTCAAAGGAAAGACGAGAAATGGTGGTTGCCAGTTCCCTGTGTTCACCCTGGTGGCCTCTCTGATAAGTCAAGGAAGCACTTGATTGAGAAAAGAGATTGTGCAAATCAAATTCATAAAGCAGCCATGGCAATAAATAGCAGTGTTCTAGCAGAGATGGTTATCCCTGAGACATACATGGCAAATCTTCCCAAGAGTGGAAGAGCATGCCTAGGGGACACAGTTTACCGCTATATGTCTTCTGCAGACAAATTCTCACCTGATCACCTTCTTGATTGCCTTAAAATAAGCTCTGAACATGAAGCACTTGAGCTGGCAGACAGGGTTGAATCTTCGATGTACACATGGCGGCGAAAGGCTTGTTTAAGCAACTCAAAATCATCATGGAACAAAGTGAAGGATCTCATGGCCGAAACCGACCGCAAAGACAAGAACTTTTTGTTAGCTGAGAAAGCTGAGACTTTGTTGTTCTGCTTGAAGCAAAGATATCCTGAACTTTCACAGACTTCCTTGGACACATGCAAAATTCAATACAATCAGGATGTAGGAAAAGCAATACTAGAAAGCTACTCAAGAGTTTTAGAAGGCTTAGCATTCAACATTGTTGCTTGGATTGAAGATGTTCATTGTGCAGATAAGTCAATGAGAAACCAACATGTATAG 1473 0.4148 MENSSNFDESSDLGYQQSTSSMDQNDQSTEYSPFSGDSFAYCRSNSEASNLSSLEPVDDNHSFASSDLQPSPPSRWIAAATMRTESSHHHGAALSSLGGMKKRMHSLDSKSDDLDLLESELEMMKERFAKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKAEKKAMWKREMNCLLSLCDYIVEFAPTAQCLDDGTIVEMMTSRPRSDIYINLPALQKLDTLLMEILDSFKDTEFWYAEQGSMSGNSSRSRAGSFRRVVVQRKDEKWWLPVPCVHPGGLSDKSRKHLIEKRDCANQIHKAAMAINSSVLAEMVIPETYMANLPKSGRACLGDTVYRYMSSADKFSPDHLLDCLKISSEHEALELADRVESSMYTWRRKACLSNSKSSWNKVKDLMAETDRKDKNFLLAEKAETLLFCLKQRYPELSQTSLDTCKIQYNQDVGKAILESYSRVLEGLAFNIVAWIEDVHCADKSMRNQHV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0057 490 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 119 486 IPR005512 GO:0005085
Ahy12g0057 490 ProSiteProfiles PRONE domain profile. 111 490 IPR005512 GO:0005085
Ahy12g0057 490 MobiDBLite consensus disorder prediction 50 72 - -
Ahy12g0057 490 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 334 - -
Ahy12g0057 490 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 334 490 - -
Ahy12g0057 490 MobiDBLite consensus disorder prediction 50 74 - -
Ahy12g0057 490 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 334 IPR038937 GO:0005085
Ahy12g0057 490 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 334 490 IPR038937 GO:0005085
Ahy12g0057 490 Gene3D PRONE domain, subdomain 1 356 490 - -
Ahy12g0057 490 Gene3D PRONE domain, subdomain 1 114 355 - -
Ahy12g0057 490 Coils Coil 107 127 - -
Ahy12g0057 490 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0057 Ahy-Chr12 1561956 1565560 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0057 - - gmx:100785956 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0057 12 1561956 1565560 Ahy2g0019 2 191669 195168 hybridization
Ahy14g2432 14 128831536 128835733 Ahy12g0057 12 1561956 1565560 PCT
Ahy4g2167 4 116751366 116758152 Ahy12g0057 12 1561956 1565560 PCT
Ahy12g0057 12 1561956 1565560 Ahy14g2432 14 128831536 128835733 PCT
Ahy12g0057 12 1561956 1565560 Ahy4g2167 4 116751366 116758152 PCT