Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2146 ATGACCAAGGAAGAACAAGTGTTTGAGTTCCTCGGGTGTGTTCCTCTGCTACAGAGACTTCCTAGCTCCTCCGTCAGGAAGATTTCTCAGCTTGTGATTGTTAAGCACTATGAGCCCGGAGATTATGTTGTTCGTGAGGGGGAACCTGCAGATGGGCTTTACTTCATATTTGAAGGAGAGGCTGAAGTTATTGGATCGGATAGAACTGATGATGAAAATCATCCAGAATTTCTATTAAAAAGATATGACTATTTTGGTTATGGTCTAGCAAATGCTGTTCATCAAGCTGATGTCATAGCTCTGACTAAGTTGTCATGTTTATTGCTGCTTCATGAGCACTCAGCACTGCTACAGCCAAATTCTATTTGGAGTGAAGAAAAATCTGTTGATACATGCTCGCTAGTGGAGCATATATTGCATTTGGAGCCTATAGAGGTAGATATCTTCCGAGGAATCACCCCTCCAAAGGCTCCGAAATTCGGGAAGGTGTTTGGTGGACAGACGGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCTTAAAGTTGTTCATAGCTTGCATGCCTATTTTCTTCTTGTTGGGGATTTTAACATGCCAATTATATATCAAGTTCATAGACTCCGTGAAGGGAAGAGCTTTGCCACAAGGAGAGTGGATGCAATTCAAAAGGGAAATATCATTTTCACATTGATGGCTTCATTTCAAAAAGAGGAAATTGGGTTTGAACACCAGGAAGTGACTATGCCATCTGTCCCTAATCCAGATGAGCTTCTTTCAATGGAAGAGTTACGGGAACAACGTCTTACTGACCCACGTCTCCCAAGAACTTACCGTAACAAGGTTGCTACATCCGAGTTCATTCCCTGGCCCATAGAGATAAGGTTCTGTGAGCCAAAAACTAAAACAACTCAGACCAAATCTCCTCCCAGCTTGAGATACTGGTTTAGAGCAAAGGGGAAACTTTCAGATGATCAGGCCTTGCATAGGTGTGTGGTGGCATATGCTTCTGATCTGATATTTCTTCAAGTTAGCTTAAACCCTCATCGTCGAAAGGGCTTCAAGGCCCGGGCTGTTAGCCTAGACCACTCGATGTGGTTTCATCGCCCTCTAAGAGCTGATGACTGGGTTCTATTTGTGATCTTTTCTCCTAGTACCTCCAATGCGCGTGGCTATGTCTCAGGCCAAATGTTCAATCAGAAGGGAGAACACCTTGTATCATTGATTCAAGAAGGTCTAATGAGGAAAGTTAATACTCCAAATTCAGCCATCAAATCTAAGTTGTGA 1293 0.4316 MTKEEQVFEFLGCVPLLQRLPSSSVRKISQLVIVKHYEPGDYVVREGEPADGLYFIFEGEAEVIGSDRTDDENHPEFLLKRYDYFGYGLANAVHQADVIALTKLSCLLLLHEHSALLQPNSIWSEEKSVDTCSLVEHILHLEPIEVDIFRGITPPKAPKFGKVFGGQTVGQALAAASKSVDCLKVVHSLHAYFLLVGDFNMPIIYQVHRLREGKSFATRRVDAIQKGNIIFTLMASFQKEEIGFEHQEVTMPSVPNPDELLSMEELREQRLTDPRLPRTYRNKVATSEFIPWPIEIRFCEPKTKTTQTKSPPSLRYWFRAKGKLSDDQALHRCVVAYASDLIFLQVSLNPHRRKGFKARAVSLDHSMWFHRPLRADDWVLFVIFSPSTSNARGYVSGQMFNQKGEHLVSLIQEGLMRKVNTPNSAIKSKL* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2146 430 Gene3D - 130 419 IPR042171 -
Ahy4g2146 430 ProSiteProfiles cAMP/cGMP binding motif profile. 16 86 IPR000595 -
Ahy4g2146 430 Pfam Cyclic nucleotide-binding domain 35 109 IPR000595 -
Ahy4g2146 430 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 43 59 IPR018488 -
Ahy4g2146 430 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 249 418 IPR029069 -
Ahy4g2146 430 Pfam Thioesterase-like superfamily 154 416 - -
Ahy4g2146 430 CDD Thioesterase_II_repeat2 147 239 - -
Ahy4g2146 430 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 134 241 IPR029069 -
Ahy4g2146 430 CDD CAP_ED 16 100 IPR000595 -
Ahy4g2146 430 PANTHER ACYL-COA THIOESTERASE 52 430 - -
Ahy4g2146 430 SMART cnmp_10 16 135 IPR000595 -
Ahy4g2146 430 PANTHER ACYL-COA THIOESTERASE 52 430 IPR003703 GO:0006637|GO:0047617
Ahy4g2146 430 Gene3D Jelly Rolls 1 126 IPR014710 -
Ahy4g2146 430 SUPERFAMILY cAMP-binding domain-like 6 109 IPR018490 -
Ahy4g2146 430 CDD Thioesterase_II_repeat1 314 416 - -
Ahy4g2146 430 TIGRFAM tesB: acyl-CoA thioesterase II 139 417 IPR003703 GO:0006637|GO:0047617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2146 Ahy-Chr4 115829787 115836200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2146 5 430 Acyl Lipid Metabolism Gene Families AT1G01710 68.779 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2146 K01068 - gmx:100813197 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2420 14 127744630 127750258 Ahy4g2146 4 115829787 115836200 hybridization
Ahy4g2146 4 115829787 115836200 Ahy12g0051 12 1495231 1498740 PCT
Ahy4g2146 4 115829787 115836200 Ahy2g0015 2 116220 119798 PCT
Ahy12g0051 12 1495231 1498740 Ahy4g2146 4 115829787 115836200 PCT
Ahy2g0015 2 116220 119798 Ahy4g2146 4 115829787 115836200 PCT