Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2420 ATGGCCAAGGAAGAACAAGTGTTTGAGTTCCTCGGGTGTGTTCCTCTGCTACAGAGACTTCCTAGCTCCTCCGTCAGGAAGATTTCTCAGCTTGTGATTGTTAAGCACTATGAGCCTGGAGAGTATGTTGTTCGTGAGGGGGAACCTGCAGATGGGCTTTACTTCATATTTGAAGGAGAGGCTGAAGTTATTGGATCGGATAGAACTGATGATGAAAATCATCCAGAATTTCTATTAAAAAGATATGACTATTTTGGTTATGGTCTAGCAAATGCTGTTCATCAAGCTGATGTCATAGCTCTGACTAAGTTGTCATGTTTATTGCTGCTTCATGAGCACTCAGCACTGCTACAGCCAAATTCTATTTGGAGTGAAGAAAAACCTGTTGATACATGCTCGCTAGTGGAGCATATATTGCATTTGGAGCCTATAGAGATATCTTCCGAGGAATCACCCCTCCAAAGGCTCCAAAATTCGGGAAGGTGTTTGGTGGACAGACAGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCTTAAAGTTGTTCATAGCTTGCATGCCTATTTTCTTCTTGTTGGGGATTTTAACAAAAGAAGAAATTGGGTTTGAACACCAGGAAGTGACTATGCCATCTGTCCCTAATCCAGATGAGCTTCTTTCAATGGAAGAGTTACGGGAACAACGTCTTACTGACCCTCGTCTCCCAAGAACTTACCGTAACAAGGTTGCTACATCCGAGTTCATTCCCTGGCCCATAGAGATAAGGTTCTGTGAGCCTAAAACTAAAACAACTCAGACCAAATCTCCTCCCAGTTTGAGATACTGGTTTAGAGCAAAGGGGAAACTTTCAGATGATCAGGCCTTGCATAGGTGTGTGGTGGCATATGCTTCTGATCTGATATTTCTTCAAGTTAGCTTAAACCCTCATCGTCGAAAGGGCTTCAAGGCCCGGGCTGTTAGCCTAGACCACTCGATGTGGTTTCATCGCCCTCTAAGAGCTGATGACTGGGTTCTATTTGTGATCTTTTCTCCTAGTACCTCCAATGCGCGTGGCTATGTCTCAGGCCAAATGTTCAATCAGAAGGGAGAACACCTTGTATCATTGGTTCAAGAAGGTCTAATGAGGAAAGTTAGTACTCCAAATTCAGCCATCAAATCTAAGTTGTGA 1176 0.4362 MAKEEQVFEFLGCVPLLQRLPSSSVRKISQLVIVKHYEPGEYVVREGEPADGLYFIFEGEAEVIGSDRTDDENHPEFLLKRYDYFGYGLANAVHQADVIALTKLSCLLLLHEHSALLQPNSIWSEEKPVDTCSLVEHILHLEPIEISSEESPLQRLQNSGRCLVDRQLDRHWLQHQNLLIVLKLFIACMPIFFLLGILTKEEIGFEHQEVTMPSVPNPDELLSMEELREQRLTDPRLPRTYRNKVATSEFIPWPIEIRFCEPKTKTTQTKSPPSLRYWFRAKGKLSDDQALHRCVVAYASDLIFLQVSLNPHRRKGFKARAVSLDHSMWFHRPLRADDWVLFVIFSPSTSNARGYVSGQMFNQKGEHLVSLVQEGLMRKVSTPNSAIKSKL* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2420 391 Pfam Cyclic nucleotide-binding domain 35 109 IPR000595 -
Ahy14g2420 391 Gene3D - 173 380 IPR042171 -
Ahy14g2420 391 PANTHER ACYL-COA THIOESTERASE 191 391 - -
Ahy14g2420 391 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 43 59 IPR018488 -
Ahy14g2420 391 Pfam Thioesterase-like superfamily 206 377 - -
Ahy14g2420 391 SMART cnmp_10 16 135 IPR000595 -
Ahy14g2420 391 CDD CAP_ED 16 100 IPR000595 -
Ahy14g2420 391 PANTHER ACYL-COA THIOESTERASE 52 146 - -
Ahy14g2420 391 ProSiteProfiles cAMP/cGMP binding motif profile. 16 86 IPR000595 -
Ahy14g2420 391 SUPERFAMILY cAMP-binding domain-like 6 109 IPR018490 -
Ahy14g2420 391 PANTHER ACYL-COA THIOESTERASE 191 391 IPR003703 GO:0006637|GO:0047617
Ahy14g2420 391 PANTHER ACYL-COA THIOESTERASE 52 146 IPR003703 GO:0006637|GO:0047617
Ahy14g2420 391 CDD Thioesterase_II_repeat1 275 377 - -
Ahy14g2420 391 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 210 379 IPR029069 -
Ahy14g2420 391 Gene3D Jelly Rolls 1 123 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2420 Ahy-Chr14 127744630 127750258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2420 5 391 Acyl Lipid Metabolism Gene Families AT1G01710 54.225 1.46e-157 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2420 K01068 - gmx:100813197 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2420 14 127744630 127750258 Ahy4g2146 4 115829787 115836200 hybridization
Ahy14g2420 14 127744630 127750258 Ahy12g0051 12 1495231 1498740 PCT
Ahy14g2420 14 127744630 127750258 Ahy2g0015 2 116220 119798 PCT
Ahy12g0051 12 1495231 1498740 Ahy14g2420 14 127744630 127750258 PCT
Ahy2g0015 2 116220 119798 Ahy14g2420 14 127744630 127750258 PCT