Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2135 ATGAAGAGTTTTTGCTCAAAGGCACCCTTAATTTTCCTCATCACTTTTATAATTATCACAAATTGCTTGTTCTCCGAAGCACAAAAATGTCGCCCAAGCGGCCGAATCATAGGGAAGAAACCTCCTCCAGGACAGTGCAACCAAGAAGATGATTCAGATTGTTGCTTGCAAGGCAAGGTATACACAACCTATGAATGTTCGCCACAAGTGACAGCCCAAACAAAGGCCTACCTCACACTTAACAGCTTCCAGAAAGGTGGAGACGGCGGCGGCCCTTCAGAGTGTGACAACAAGTACCACCCGGACGACACTCCGGTAGTAGCCCTGTCAACAGGATGGTTCAACAATAAGAGCAGGTGTCTAAACAACATTAGGATCAGCGCGAATGGGAGGAGCGTGGTGGCGATGGTGGTGGATGAGTGTGACTCAAGAAAGGGGTGTGATGAGGACCATGATTACCAACCTCCTTGTAAGAACAACATTGTTGATGCCTCTAAGGCTGTTTGGGAAGCATTGGGTGTACCACATGATCAATGGGGTGGCATGGACATTACTTGGTCTGATGCTTGA 570 0.4772 MKSFCSKAPLIFLITFIIITNCLFSEAQKCRPSGRIIGKKPPPGQCNQEDDSDCCLQGKVYTTYECSPQVTAQTKAYLTLNSFQKGGDGGGPSECDNKYHPDDTPVVALSTGWFNNKSRCLNNIRISANGRSVVAMVVDECDSRKGCDEDHDYQPPCKNNIVDASKAVWEALGVPHDQWGGMDITWSDA* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2135 189 PANTHER LIPID TRANSFER PROTEIN 5 189 - -
Ahy4g2135 189 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 5 189 IPR039271 -
Ahy4g2135 189 Gene3D - 76 188 IPR036908 -
Ahy4g2135 189 SUPERFAMILY Barwin-like endoglucanases 68 187 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2135 Ahy-Chr4 115644427 115645173 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2135 - - cam:101500410 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2408 14 127506887 127507596 Ahy4g2135 4 115644427 115645173 hybridization
Ahy4g2135 4 115644427 115645173 Ahy12g0037 12 1401956 1402534 PCT
Ahy4g2135 4 115644427 115645173 Ahy2g0001 2 18671 19252 PCT
Ahy12g0037 12 1401956 1402534 Ahy4g2135 4 115644427 115645173 PCT
Ahy2g0001 2 18671 19252 Ahy4g2135 4 115644427 115645173 PCT