Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0037 ATGAAGATCTCAAAAGCTTGTGTAATCTTGGTTCTTCTCATAATAAGCTTTCTAAGTGCACTAGCCCAAGCTCATAAACATGATTATGATGATCACACATGTAAGCCTAGTGGCAAGTTAAGGGGCAAAAAACCGCCAAAAGGAAAATGCAAGAGAGACAATTTATCTAAGTGTTGCAAACATGGCAAGGTTTATACAACGTACGACTGTTCGCCCAAGATCACGAACCGAACGAAGGCGATCTTAACACTGAACGGATTTGAGAAGGGTAAGGACGGAGGAGCGCCGTCTGAGTGCGACAAGTACCACTCAGACGACGTTCCAATCGTGGCACTGTCGTCGGGGTGGTTCAACAAAAAGAAGAGGTGCGTGAACAAGATTAGCATATTTGGGAATGGAAGAAAGATTAATGCAATGGTGGTTGATGAGTGTGACTCTACAATGGGGTGTGATTCTGAGCATGATTTCCAGCCTCCTTGCCCTAACAATGTTGTTGATGCCTCCAGAGCTGTTTGGAAGGCCTTGGGTGTTCCAAAGAAGGATTGGGGTGGAATGCAAGTTTTTTGGACTAATGCTTGA 579 0.4456 MKISKACVILVLLIISFLSALAQAHKHDYDDHTCKPSGKLRGKKPPKGKCKRDNLSKCCKHGKVYTTYDCSPKITNRTKAILTLNGFEKGKDGGAPSECDKYHSDDVPIVALSSGWFNKKKRCVNKISIFGNGRKINAMVVDECDSTMGCDSEHDFQPPCPNNVVDASRAVWKALGVPKKDWGGMQVFWTNA* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0037 192 Gene3D - 65 191 IPR036908 -
Ahy12g0037 192 PANTHER RIPENING RELATED PROTEIN FAMILY 15 191 - -
Ahy12g0037 192 MobiDBLite consensus disorder prediction 29 48 - -
Ahy12g0037 192 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 15 191 IPR039271 -
Ahy12g0037 192 SUPERFAMILY Barwin-like endoglucanases 82 190 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0037 Ahy-Chr12 1401956 1402534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0037 - - adu:107472800 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0037 12 1401956 1402534 Ahy2g0001 2 18671 19252 hybridization
Ahy14g2408 14 127506887 127507596 Ahy12g0037 12 1401956 1402534 PCT
Ahy4g2135 4 115644427 115645173 Ahy12g0037 12 1401956 1402534 PCT
Ahy12g0037 12 1401956 1402534 Ahy14g2408 14 127506887 127507596 PCT
Ahy12g0037 12 1401956 1402534 Ahy4g2135 4 115644427 115645173 PCT