Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2012 ATGGCGTCCACCAACAGCGGGAACAAGGGATCACGTTTCCCACTTCTCGCGTTCCTTCTCATCTGCCTCCTCGCTCCTCTCCTCTTCTTCTTCTTCTTCTCCAGAGGCCTTCACAATGCTCCCGATCAAGATGTTATGTCAACCGTTCCTAGTAAACAGGTTGCCAAATGGACAGAATGGCAGACACTGCAGGACCTTAAATTGTATTTTTCAAAAGAGGCTCTTGATGTTATTGTATCGAGCACAGATGATTTGGGTCCTTTGAGCCTTGAGAATTTCAAAAAAAATAATTTGTTACCTTCATGGAGAATCACTGGGTTAAAGACTTCAAATGCTACCTATGAGCTAAACCAACCAACAACACATGGTGTACAGGAAAAACAAGAGGTGAAGGAAGGCAGATCTTCAGTTGGTCTTGATCAATGGACTCTTAGTCCTGTCCACTTATCCAGAAGGCACTTAATAGAGAAAAGGAAGGAAAAACGTGCTGCTGAGTTGGTGAAACTGGAGGATGAAGTAATTGTAAAACTTGAAGATTCAGCTATTGAACGCTCAAAGACAGTAGATTCAGCAGTTTTAGGTAAATACAACATGTGGAGGAAAGAAAATGACAATGAAAATGCTGATTCTACTATTCGGTTGATTCGAGACCAAATTGTTATGGCTAGAGTGTATTTGAGCCTTGCAAAGATGAAGAACAAGCTTGACCTGTACCAAGAGCTGCAAAATCGGATTGGAGAGAGTCAGCATGATTTAGGTGAGGCAACTGCTGATGCTGATCTACCTAAAAGTGCACATGAAAAAATCAAAGCCATGGGTCAAGTCCTGTCTAAAGCAAAAGATCAATTGTATGACTGCAAGTTGGTCACTGGGAAATTGAGGGCAATGCTACAAACAGCTGATGAGCAAGTTAGGGGCCTGAAAAAGCAAAGTACATTCCTCAGTCAGTTGGCTGCCAAGACCATACCTGATGGAATCCACTGCTTATCGATGCGCCTTACCATTGATTATTACCTCCTTTCTCCTGAAAAGAGAAAGTTTCCTAAGAGTGAGAATTTGGAGAATCCTAATCTTTATCATTATGCCCTTTTCTCAGACAATGTCTTGGCTGCATCAGTGGTTGTCAACTCAGCTATTATGAATGCAAAGGATCCTTCAAAGCATGTTTTTCATCTTGTTACTGATAAGCTAAATTTCGGAGCCATGAACATGTGGTTTTTGTTGAACCCTCCTGGAAAAGCTACTATCCATGTTGAAAATGTTGATGAATTTAAGTGGTTGAATTCATCTTACTGCCCTGTCTTGAGGCAGCTCGAATCTGCAACAATGAAAGAGTATTATTTCAAGGCAGGCCATCCAACATCCGGTGGTTCCTCTAATCTGAAGTACAGAAACCCGAAATATCTCTCAATGCTCAACCATCTTAGGTTCTATCTTCCGCAAGTTTATCCAAAATTGGATAAGATTCTTTTTCTTGATGATGACATTATTGTCCAGAAGGATTTGACAGGATTATGGGCCGTGAATCTTCATGGAAAAGTAAATGGTGCCGTTGAAACATGTGGGGAGAGTTTTCACCGTTTCGACAAGTATCTTAACTTTTCGAATCCTCATATTGCTAAAAATTTTGATCCCAATGCCTGTGGTTGGGCTTATGGAATGAACATGTTTGATTTAAAGGAGTGGAAAAAGAAGGATATTACCGGCATATATCACAAGTGGCAGAATATGAATGAAGATAGGGTGCTATGGAAGCTGGGGACATTACCTCCAGGTCTAATGACATTCTATGGATTGACGCATCCACTAAACAAATCATGGCACGTACTTGGTTTAGGTTACAATCCGAGTGTAGATAAATCTGAGATCGACAATGCGGCAGTTATTCACTACAATGGTAATATGAAGCCATGGCTAGAGATAGCCATGACAAAATACCGGTCGTATTGGACCAAATATGTCAAGTATGATCATCCCTATCTTAGAAACTGTAAGCTAACTGAATGA 2007 0.4081 MASTNSGNKGSRFPLLAFLLICLLAPLLFFFFFSRGLHNAPDQDVMSTVPSKQVAKWTEWQTLQDLKLYFSKEALDVIVSSTDDLGPLSLENFKKNNLLPSWRITGLKTSNATYELNQPTTHGVQEKQEVKEGRSSVGLDQWTLSPVHLSRRHLIEKRKEKRAAELVKLEDEVIVKLEDSAIERSKTVDSAVLGKYNMWRKENDNENADSTIRLIRDQIVMARVYLSLAKMKNKLDLYQELQNRIGESQHDLGEATADADLPKSAHEKIKAMGQVLSKAKDQLYDCKLVTGKLRAMLQTADEQVRGLKKQSTFLSQLAAKTIPDGIHCLSMRLTIDYYLLSPEKRKFPKSENLENPNLYHYALFSDNVLAASVVVNSAIMNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPTSGGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIIVQKDLTGLWAVNLHGKVNGAVETCGESFHRFDKYLNFSNPHIAKNFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYNPSVDKSEIDNAAVIHYNGNMKPWLEIAMTKYRSYWTKYVKYDHPYLRNCKLTE* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2012 668 Coils Coil 238 258 - -
Ahy4g2012 668 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 7 668 IPR029993 GO:0047262
Ahy4g2012 668 Pfam Glycosyl transferase family 8 328 642 IPR002495 GO:0016757
Ahy4g2012 668 PANTHER HEXOSYLTRANSFERASE 7 668 - -
Ahy4g2012 668 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 362 662 IPR029044 -
Ahy4g2012 668 CDD GT8_like_1 359 655 - -
Ahy4g2012 668 SUPERFAMILY Nucleotide-diphospho-sugar transferases 359 665 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2012 Ahy-Chr4 112882475 112887640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2012 10 668 Glycosyltransferase AT3G61130 75.529 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2012 K13648 - gmx:100798073 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2284 14 124204223 124209245 Ahy4g2012 4 112882475 112887640 hybridization
Ahy4g2012 4 112882475 112887640 Ahy12g2454 12 113197359 113202821 PCT
Ahy4g2012 4 112882475 112887640 Ahy2g2120 2 96638944 96644368 PCT
Ahy12g2454 12 113197359 113202821 Ahy4g2012 4 112882475 112887640 PCT
Ahy2g2120 2 96638944 96644368 Ahy4g2012 4 112882475 112887640 PCT