Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2454 ATGGCGCCAAAGAGAGGGATTTCGTTCTCAAGGAGCAGAAGCAGCAGCGGCAAGTTGTCGTCATCATCTTCGTCATCGTCATCGCATTTTCCTGTTTTGGCGTTCGTGATTCTCTGTGTTATGGCTCCGATGATTTTCTTCCTCGGAAGAGGCCTCTACGCTGCGGATCAAGATGATTTTTCAGCAGTTCCAAGTAATCAGGTTGTCACATGGAGAGGATGGCAAGCATTGCAGAATCTTAAATCATTTTTTCCAAAAGAGGTTCTTGATGTTATCGTATCCAGCACGAATGATACAGGGCCTTTGAGTCTTGATAATTTCAGAAAAAATAATATGTCTGCCTCTTGGAGAGTCGTGGAGTTGGAGACTTCAAATGCCACAAATGAGCCCAAAACAGATGACAGACAAGAGAAACCAAAGCTGAAGGATGGAAAATCTTCAGCTGATGGTCGTACTCGATGGATTGATAGTCCTACGCAACAAGCCAGAAGGCAATTAATAGGGAAAAGGCGGGAGAGGCGTGCTGCTGAGTTGGTAAAATTGAACGATGAATTAATCGCAAAACTTGAAAATTCAGCTATTGAACGCTCAAAATCTGTTGAGTCAGCTGTTCTAGGTAAATACAGCATTTGGAGGAAAGAAGTTGAGTATGAAAATGCTGATTCTACTGTTCGGTTGATGCGGGACCAAAACATTATGGCTAGGGTATATTTAAGTATTGCAAAGATGAAGAACAAGCTTGAACTTTTCCAAGAACTGCAAACTCGGCTAAAAGAGAGTAAACGTGCTTTAGGCGATGCTACTTCTGATGCTGATCTAAATCGCAGTGCACATGAAAAGATAAAGGCTATGGGTCAAGTCCTGTCAAAAGCAAGAGAACAATTGTATGACTGCAAATTGGTATCTGGGAAACTAAGGGCAATGCTACAAACAGCCGATGAGCATGTTCGGAGCTTTAAGAAACAGAGTACATTTCTCAGTCAGTTGGCTGCAAAGACGATACCTAACGGAATCCATTGCTTATCTATGCGTCTTACCATAGATTACTACCTTCTTCCACCGGAAAAGAGAAAGTTCCCTGGGAGTGAGAACTTGGAGGATCCCAGTCTTTATCATTATGCACTGTTTTCAGACAATGTCTTGGCTGCATCTGTTGTTGTCAACTCAACTATTACGAATGCTAAGGATCCTTCAAAGCATGTTTTTCATCTTGTTACTGACAAACTAAATTTTGGAGCCATGAACATGTGGTTTCTGTTGAACCCACCTGGAAAAGCTACAATTCATGTTGAAAATGTCGATGAATTTAAGTGGTTGAACTCATCCTACTGCCCAGTCCTGCGGCAGCTAGAATCTGCAACAATGAGAGAGTATTATTTTAAGGCAGGCCATCCGAACACACTTTCTTCTGGTGCTTCAAATCTGAAGTACAGAAACCCCAAATATCTGTCAATGCTCAACCATCTGAGATTCTACCTTCCACAAGTTTATCCAAAGTTGGATAAGATCCTTTTTCTCGATGATGACATCGTTGTCCAGAAGGATTTGACTGGTTTGTGGGCTGTGAATCTCCAAGGTAAAGTAAACGGTGCAGTCGAAACATGTGGTGCGAGCTTTCACCGATTTGACAAGTATCTGAACTTTTCAAATCCACATATTGCAAGAAATTTTGATCCGAATGCTTGTGGCTGGGCATATGGAATGAACATATTTGATCTGAAGGAGTGGAAAAAGAAGGATATCACTGGCATATATCACAAGTGGCAGAATATGAATGAAGACAGGGTGCTGTGGAAGCTGGGTACATTACCCCCGGGGCTAATGACATTCTATGGTCTCACGCATCCGCTAAATAAATCATGGCACGTTCTTGGTTTGGGTTATAATCCAAGCGTAGATCGATCCGAGATTGATAGTGCAGCAGTTGTACACTACAATGGCAACATGAAACCATGGTTGGAGATTGCCATGACAAAGTATAGGTCTTACTGGTCCAAATATGTGAAGTATGATCATCCCTATCTTCGGAACTGTAAGCTACATGAGTAA 2049 0.4202 MAPKRGISFSRSRSSSGKLSSSSSSSSSHFPVLAFVILCVMAPMIFFLGRGLYAADQDDFSAVPSNQVVTWRGWQALQNLKSFFPKEVLDVIVSSTNDTGPLSLDNFRKNNMSASWRVVELETSNATNEPKTDDRQEKPKLKDGKSSADGRTRWIDSPTQQARRQLIGKRRERRAAELVKLNDELIAKLENSAIERSKSVESAVLGKYSIWRKEVEYENADSTVRLMRDQNIMARVYLSIAKMKNKLELFQELQTRLKESKRALGDATSDADLNRSAHEKIKAMGQVLSKAREQLYDCKLVSGKLRAMLQTADEHVRSFKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPEKRKFPGSENLEDPSLYHYALFSDNVLAASVVVNSTITNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESATMREYYFKAGHPNTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVNLQGKVNGAVETCGASFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYNPSVDRSEIDSAAVVHYNGNMKPWLEIAMTKYRSYWSKYVKYDHPYLRNCKLHE* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2454 682 Coils Coil 240 270 - -
Ahy12g2454 682 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 24 682 IPR029993 GO:0047262
Ahy12g2454 682 Pfam Glycosyl transferase family 8 340 656 IPR002495 GO:0016757
Ahy12g2454 682 MobiDBLite consensus disorder prediction 127 150 - -
Ahy12g2454 682 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 373 674 IPR029044 -
Ahy12g2454 682 CDD GT8_like_1 371 669 - -
Ahy12g2454 682 PANTHER HEXOSYLTRANSFERASE 24 682 - -
Ahy12g2454 682 SUPERFAMILY Nucleotide-diphospho-sugar transferases 371 679 IPR029044 -
Ahy12g2454 682 MobiDBLite consensus disorder prediction 1 27 - -
Ahy12g2454 682 MobiDBLite consensus disorder prediction 122 163 - -
Ahy12g2454 682 MobiDBLite consensus disorder prediction 8 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2454 Ahy-Chr12 113197359 113202821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2454 1 682 Glycosyltransferase AT3G61130 73.285 0.0 1040
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2454 K13648 - gmx:100811181 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2454 12 113197359 113202821 Ahy12g2454 12 113197359 113202821 ECH
Ahy12g2454 12 113197359 113202821 Ahy2g2120 2 96638944 96644368 hybridization
Ahy14g2284 14 124204223 124209245 Ahy12g2454 12 113197359 113202821 PCT
Ahy4g2012 4 112882475 112887640 Ahy12g2454 12 113197359 113202821 PCT
Ahy12g2454 12 113197359 113202821 Ahy14g2284 14 124204223 124209245 PCT
Ahy12g2454 12 113197359 113202821 Ahy4g2012 4 112882475 112887640 PCT