Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1742 ATGTCTCGAAGATATGATAGCCGTACAACAATCTTTTCCCCTGAGGGACGTTTGTACCAAGTGGAGTATGCAATGGAGGCCATCGGGAATGCTGGTACTGCAATAGGGATCCTATCAAAAGACGGGGTTGTTTTGGTTGGTGAAAAGAAGGTCACATCCAAGTTGCTGCAAACTTCAACTTCCACCGAGAAAATGTACAAGATTGATGATCATGTTGCATGCGCTGTGGCTGGGATTATGTCTGATGCCAACATCCTCATCAATACTGCTAGAGTCCAAGCACAACGCTACACATATGCTTACCAAGAGCCAATGCCCGTCGAGCAGTTGGTTCAGTCTCTCTGTGACACTAAGCAAGGTTACACACAATTCGGTGGTCTTCGTCTGTTTGGGGTCTCGTTCCTTTTTGCCGGGTGGGACAAAAACTTTGGCTTTCAGCTTTACATGAGTGACCCTAGTGGGAACTACGGTGGTTGGAAAGCTGCGGCTATCGGTGCAAACAACCAGGCGGCACAGTCAATACTAAAACAGGACTACAAGGAGGATATCACAAGGGAAGAAGCAGTTCAACTTGCATTGAAGGTGCTAAGCAAAACTATGGACAGCACAAGTCTAACTTCAGAAAAGCTTGAACTCGCAGAGGTTTTCCTCGCGCCCTCTGGAAAGGTCAAGTACCAAGTTTGCTCCCCCGAGACACTGACAAAGCTGTTGGTGAAGTTTGGCGTCACCCAACCAGCAACTGACACTGCTTAG 753 0.4768 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRLFGVSFLFAGWDKNFGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKEDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLAPSGKVKYQVCSPETLTKLLVKFGVTQPATDTA* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1742 250 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 249 IPR029055 -
Ahy4g1742 250 CDD proteasome_alpha_type_4 3 215 - -
Ahy4g1742 250 Pfam Proteasome subunit A N-terminal signature 5 27 IPR000426 GO:0006511|GO:0019773
Ahy4g1742 250 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 231 IPR029055 -
Ahy4g1742 250 ProSitePatterns Proteasome alpha-type subunits signature. 5 27 IPR000426 GO:0006511|GO:0019773
Ahy4g1742 250 PANTHER PROTEASOME SUBUNIT ALPHA TYPE-4-A 1 249 IPR034647 GO:0019773
Ahy4g1742 250 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 249 - -
Ahy4g1742 250 Pfam Proteasome subunit 30 214 IPR001353 GO:0005839|GO:0051603
Ahy4g1742 250 ProSiteProfiles Proteasome alpha-type subunit profile. 20 237 IPR023332 -
Ahy4g1742 250 SMART Proteasome_A_N_2 5 27 IPR000426 GO:0006511|GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1742 Ahy-Chr4 102808350 102811156 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1742 K02728 - gmx:100786457 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1973 14 111947303 111950141 Ahy4g1742 4 102808350 102811156 hybridization
Ahy4g1742 4 102808350 102811156 Ahy12g2112 12 106151773 106154671 PCT
Ahy4g1742 4 102808350 102811156 Ahy2g1844 2 91648094 91652558 PCT
Ahy12g2112 12 106151773 106154671 Ahy4g1742 4 102808350 102811156 PCT
Ahy2g1844 2 91648094 91652558 Ahy4g1742 4 102808350 102811156 PCT