Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1182 ATGTTGCTCGTTCTCACTAGTCACTCAACGCAACTCAACCGCCTCCCGCCGTCGCACGAAGGAGAAGCGCCACTAGCCACAACACAGTCAAGAATGGACTCCGACGAGGAACACGCGAAAACCCTAACGCCGACGGAGACGAAAGACAAGAAGCACAAGAAGAAGAAGAAGAAGAAGAAAGACGAGCTCGTTAAGGCGAAGATTGAAGTTGTGCGTGAAGAACAGGACAAGATAGGACCAGTCGTTGGGTATTTTCCTTCCGGATTCGATCCAATTAGCGATGGCGCCGCGGCGACGGGGTTTCATGTTTACAGGAACAGGAGGACGAGGAAGAGGATGCAGCTTGTGGTTGGTTCCCCTGCCTCCCCCGTCGAATACGTCGGAACTAGCTATGCCGGTGAGGCCGCCGCCGGGAACTCCTCCATGTATGCCATTGGTGTCTTTGATAAGGAAAAGGGAACGCTCAAGGTTGTTCCCGTTGCTGCCAACAAGATATTTAGATTGGAACCTAAAGTTAAAGCCTTGGATGCTGTTGACAAGGAGCCTGCTACCTCAACAGTGGAAGAGCTGACTCCCTTGGACTGGGCAGTGAAGCAGAGGCAGATTACTAATTTGTTTGGAACAAAGAAGGAAATAACAAAGACTAAAAAGAGGTTAGCTCTCACTCAAGATGATGATCCTGAATCACAAAAGAACCTGGATGTGAAGATGGAAAATGTTGATGTAAACAAATTGGCTCTTGAAGGTACTGAATCTCAAGTTGCCCGCAACATACCACCATGTAATCTTTCTGCAACCTCGCCGCAGGAGGCATATGTGTTGGATCAAATCATCCTTAAAGGAGAGTGGGGTTACCTTGAAGACATTTATTATATTTTGTTGAAGGAAGAAGAAGCTGACTTCAGTTCTTACCCAACTTTTGTTTCCAACAGGATTAATAAATTAAAGAATATTAAGGATGATTCAGAAAAGAGGAAACACTCGTGCATACTGTCATTCATCAGTCATCTTGTATCGTTCAAAGAACAGAACTCTTTCAGGGATAACTCCACCAAGAAGCGTCTGAAGATCCCCAACATTCTGCGTAATAGATTCTCGGCAATGTTTGGCAATACTTCTGGTTCTAATTCAAAATGGCTGTCTTCTGAGAAGATTAGTCTTCTCGTTTGTTATATCCTCGTGCTGACTCTTTTCTTTGACGAATTTGAGACTGACTATTGTGATATAGCAAGGGATCTGAAGATGAGCCAACTGGTGGTGAAACAACACTATGAGCATTTGGGTTGCAAGGTTAAACGTAAGAACAATGCCAACCATGCCACACTTCCCGTCCCTCTTAAATTTCCTGGTGTGCGTCAGAAGAAGCGAAAACGTTAG 1377 0.4524 MLLVLTSHSTQLNRLPPSHEGEAPLATTQSRMDSDEEHAKTLTPTETKDKKHKKKKKKKKDELVKAKIEVVREEQDKIGPVVGYFPSGFDPISDGAAATGFHVYRNRRTRKRMQLVVGSPASPVEYVGTSYAGEAAAGNSSMYAIGVFDKEKGTLKVVPVAANKIFRLEPKVKALDAVDKEPATSTVEELTPLDWAVKQRQITNLFGTKKEITKTKKRLALTQDDDPESQKNLDVKMENVDVNKLALEGTESQVARNIPPCNLSATSPQEAYVLDQIILKGEWGYLEDIYYILLKEEEADFSSYPTFVSNRINKLKNIKDDSEKRKHSCILSFISHLVSFKEQNSFRDNSTKKRLKIPNILRNRFSAMFGNTSGSNSKWLSSEKISLLVCYILVLTLFFDEFETDYCDIARDLKMSQLVVKQHYEHLGCKVKRKNNANHATLPVPLKFPGVRQKKRKR* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1182 458 Coils Coil 56 76 - -
Ahy4g1182 458 MobiDBLite consensus disorder prediction 1 16 - -
Ahy4g1182 458 MobiDBLite consensus disorder prediction 1 62 - -
Ahy4g1182 458 Pfam A49-like RNA polymerase I associated factor 99 449 IPR009668 GO:0003677|GO:0006351
Ahy4g1182 458 MobiDBLite consensus disorder prediction 31 48 - -
Ahy4g1182 458 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 50 458 IPR009668 GO:0003677|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1182 Ahy-Chr4 31695167 31698643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1182 K03005 - gmx:100812427 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1271 14 29315940 29319433 Ahy4g1182 4 31695167 31698643 hybridization