Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1271 ATGGACTCCGACGAGGAACACGCGAAAACCCTAACGCCGACGGAGACGAAAGACAAGAAGCACAAGAAGAAGAAGAAGAAGAAGAAAGACGAGCTCGTTAAGGCGAAGATTGAAGTTGTGCGTGAAGAACAGGACAAGATAGGACCAGTCGTTGGGTATTTCCCTTCCGGATTCGATCCAATTAGCGATGGCGCCGCCGCGACGGGGTTTCATGTTTACAGGAACAGGAGGACGAAGAAGAGGATGCAGCTTGTGGTTGGTTCCCCTTCCTCCCCCGTCGAATACGTCGGAACTAGCTATGCCGGTGAGGCCGCCGCCGGGCACTCCTCCATGTATGCCATTGGTGTCTTTGATAAGGAAAAGGGAACGCTCAAGGTTGTTCCCGTTGCTGCCAACAAGATATTTAGATTGGAACCTAAAGTTAAAGCCTTGGATGCCGTTGACAAGGAGCCTGCTACCTCAACAGTGGAAGAGCTGACTCCCTTGGACTGGGCAGCGAAGCAGAGGCAGATTACTAATTTGTTTGGAACAAAGAAGGAAATAACAAGGACTAAAAAGAGGTTAGCTCTCAATCAAGATGATGATCCTGAATCACAAAAGAACCTGGATGTGAAGATGGAAAATGTTGATGTAAACAAATTGGCTCTTGAAGGTACTGAATCTCAAGTTGCCCGCAACATACCACCATGTAATCTTTCTGCAACCTCGCCGCAGGAGGCATATGTATTGGATCAAATCATCCTTAAAGGAGAGTGGGGTTACCTTGAAGACATTTATTATATTTTGTTGAAGGAAGAAGAAGCTGACTTCAGTTCTTACCCAACTTTTGTTTCCAACAGGATTAATAAATTAAAGAATATTAAGGATGATTCAGAAAAGAGGAAACACTCATGCATACTGTCATTCATCAGTCATCTTGTAACGTTCAAAGAACAGAACTCTTTCAGGGATAACTCCACCATGAAGCGTCTGAAGATCCCCCACATTCTGCGTAATAGATTCTCGGCAATGTTTGGCAATACTTCTGGTTCTAATTCAAAATGGCTGTCTTCTGAGAAGATTAGTCTTCTCGTTTGTTATATCCTCGTGCTGACTCTTTTCTTTGACGAATTCGAGACTGACTATTGTGATATAGCAAAGGATCTGAAGATGAGCCAACTGGTGGTGAAACAACACTATGAGCATTTGGGTTGCAAGGTTAAACGTAAGAACAATGTCAACCATGCCACACTTCCCATCCCTCTTAAATTTCCTGGTGTGCGTCAGAGGAAGCGAAAACGTTAG 1284 0.4447 MDSDEEHAKTLTPTETKDKKHKKKKKKKKDELVKAKIEVVREEQDKIGPVVGYFPSGFDPISDGAAATGFHVYRNRRTKKRMQLVVGSPSSPVEYVGTSYAGEAAAGHSSMYAIGVFDKEKGTLKVVPVAANKIFRLEPKVKALDAVDKEPATSTVEELTPLDWAAKQRQITNLFGTKKEITRTKKRLALNQDDDPESQKNLDVKMENVDVNKLALEGTESQVARNIPPCNLSATSPQEAYVLDQIILKGEWGYLEDIYYILLKEEEADFSSYPTFVSNRINKLKNIKDDSEKRKHSCILSFISHLVTFKEQNSFRDNSTMKRLKIPHILRNRFSAMFGNTSGSNSKWLSSEKISLLVCYILVLTLFFDEFETDYCDIAKDLKMSQLVVKQHYEHLGCKVKRKNNVNHATLPIPLKFPGVRQRKRKR* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1271 427 Coils Coil 25 45 - -
Ahy14g1271 427 MobiDBLite consensus disorder prediction 1 30 - -
Ahy14g1271 427 MobiDBLite consensus disorder prediction 1 17 - -
Ahy14g1271 427 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 19 427 IPR009668 GO:0003677|GO:0006351
Ahy14g1271 427 Pfam A49-like RNA polymerase I associated factor 68 418 IPR009668 GO:0003677|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1271 Ahy-Chr14 29315940 29319433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1271 K03005 - gmx:100812427 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1271 14 29315940 29319433 Ahy4g1182 4 31695167 31698643 hybridization