Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1169 ATGAACATGTTCTACACAAGAAGACCATTCTCCTCCTCTTCTTCTTCTTGCTCCTCAAAGAACCATTCACTCCAAACGTTACTGAAGCGTGGATTCACACCAACCCTGAAATCCATCAACATATTCCTCCTCTCCCTCCTCCGCCACCGCAAGTTCAACCTCATCATCCACCTCTTCACCTCTGCCACACTCATCCCCACTAACCCTACCACCCACTCCATCCTCACATGGGCACTCCTCCATTCTAGAAGCTTCCAAGATGCCGAGAATCTCATCTTAACTCACTTCACCCATTCCCATCCTCGCATCTGGGACACACTCATCCGTACCCACCATGACCCTCAAAGGGCACTCTTTCTTCTACGCTATTGCCTCCAAAACGGTGCCGTTTTGCCCTCTCCTCTCACTTTCTCTTCTCTTATTCACAGGCTCTCTTCTCAGGGGGACCTAGGCATGGCAATGGAGGCGCTGGAGATCATGACAGATCATAGGGTAAGGTACCCTTTTGATGATTTTGTTTGTAGCTCCGTGATTTCTGGGTTTTGTAGGATTGGGAAGCCTGAACTTGCGTTAGGGTTTTATGACAATGCTGTGGGTTCTGGGGCACTGTTGAGGCCCGGCTTGGTTACTTTAACTGCAATTGTTGGTGCACTTGTTAGGTTGGGGAGGCTTGATGAGGTTTGTGGTTTGGTTAGGAGGATGGAGGAGGATGGGATTGGTTTGGATGTTGTTTTGTATAGTGTTTGGGTTTGTGGGTATGTTAAAGGGAATGACTTGGTGGAGGTTTTTCGAAAGATGAGGGAAATGGTGGTGGTGAAGGGTATCGATCATGATCATGTGAGTTATACTATACTCATTGATGGGTTTTCTAAGTTAGGCGATGTGGAGAAGTCATTTGGGATCTTGGCTAAGATGATAAAGGAAGGGAAGAGACCCAATAAGGTCACTTACACTGCAATAATATCTGCTTATTGTAAGAAGGGTAAAGTTGAGGAAGCACGTGGTGTTTTTGACAGGATAGGTGAGTTGGGAATTGAGTTGGATGAGTTTGTGTATGCAGTTTTGATTGATGGATATTGTTGGATTGGAGATTTTGGTAGTGTCTTTAAGCTATTTGTTGAAATGGAGAAAAGAGGGGTTAGTCCTAGTGTTGTTACGTATAATACCATAATAAATGGTTTGTGCAAGTTCGGGAGGACGTCTGAGGCGGATGAGTTATCAAAAGATGTGGCTGCAGATGTGATTACGTACAGCACGTTGTTGCACGGTTATACCGAAGAAGAGAACACTCCGGGGATTTTGCAGACAAAGAGGCGACTAGAAGAAGCTGGAATCGCCATGGATATCATAATGTGCAATGTGCTGATCAAAGCATTGTTTATGATGGGGGCTTTTGAAGATGTTTATGCTCTTTATAAAGGAATGCCGGAAATGGGTCTGGTTCCGAATTCCGTTACTTATTGCACAATGATTGATCAGTATTGCAAGGTAGGTAGAATTGACGAGGCACTTGTGGTATTTGACGACTTCAGAAAAACATCATTCTCTTCACCTGTATGCTACACTAGTATTATTCATGGCCTCTGCAAGAAGGGTATGGTAGAAATGGCCATTGAGGCATTAGTCGAACTCAATGATAAAGGACTGGAGTTAAGTAGATATACATTTAGGATGTTAATGAGGACAATTCTCACTGAAAAGGGTGCAAAAGAGGTTTTAGATTTAGTTTACACAATGGAAGGATTGGGCCAAGACTTATATGAGTCAGTATGTAATGATGCGATCTTTTTATTATGCAGAAGAGGATTTCTTGAGGATGCATATCGCTTGTGCTTGATGATGAGAAAGACAGGTTTATACGTTACAAGAAATTCTTATTATTCTGTTTTGAGAAGCTATCTTAGTAACAGGAATAGGGAGCACATGCTGCCCCTATTGAATATCTTTCTAAAAGAATATGGCCTAGTTGATCCAATGATGCGAAGGATACTAGCATGCTACCTATGTTTAAAAGATATCCATAGTCCCCTTCAATTTATGGGAAAAACAATCTCTCTTCCTGTCTCCATCCTCAGGGTTCTGATAAAGGAAGGTAGAGCTTTAGATGCATATAAGCTTGTGGTAAAGACTCAAGATAGTTTACAAGTCATGTATGCTGATTATGCCATTCTGATTGATGCCTTATGCAAGGGAGGATATCTCAATAAAGCATTGGATCTTTGTGCCTTCGTTGAAAAGAAAGGGATCACTTTGGACATAGTTGTATATAATTCTATAATAAATGGATTGTGCCATGAGGGACGTCTTACTGAAGCATTTCGGCTATTTGATTCATTGGAGAAACTTAATTTGATACCATCTGAAATAACTTATGCCACATTAATTTATGCACTAAGTAGGGAGGGATATCTGGTAGATGCCGAGCATGTTTTCAGTAAAATGGTTCTGAAGGGCTTTCAACCAAAAACACAAGTTTATAATTCACTACTTGAGGGTATTTCAAAGTTTGGTCAATTAGAGAATGCGCTCGAGCTTCTAAACGATATGGAGACAAAATATATTGAGCCTGACAGCTTGACGGTTAGTGCTGTCATAAATTGCCATTGCCAAAAGGGCAACATGGAAGGAGCACTTCAATTCTATTATAAGTTCAAGAGGAAGGATGTATCACCTGATTTTTTTGGGTTCTTGTACTTGATAAGAGGATTATGTTCAAAGGGACGGATGGAAGAAGCTAGGAGTGTCTTGAGAGAAATGCTCAAATCGAAGAATATTGAAGAGATAATTAACATAGTTAACAATGAGGTTGATAATGAGTCAATAGGTGGCTTTCTTGCCATTTTGTGTGAGCAAGGAAGTATTCAAGAAGCCCTTGCAGTTCTCAATGAAATTGCAAGCACGCTTTATCCTGTTCTAAGGTTATCTACATATAATCAAGGAGCTCATGCACAGAGGAACATTTCTGAGCTGAACGCTGGTTTACAATCTTCAAGGCGTCTATCCTCCTCTTGTAGAACTGGTTTGGATTTTGGATCCTGTGATGCTAGCGATGAAAGTGATCTTACAATAAATAATGATAGTCATGTGACAAGGTCCCGGCCACTCAATTTCGACTTCTATTATTCCGTGATTGCCACACATTGTGCCAAAGGGGAGCTACAGAAAGCTAATCAAGTAGCCAAGGGAATGCTTTCCCACCTAAGTCGAGGAGCTGAACATAAGAAAGAAGAGAGAAAATGA 3240 0.4145 MNMFYTRRPFSSSSSSCSSKNHSLQTLLKRGFTPTLKSINIFLLSLLRHRKFNLIIHLFTSATLIPTNPTTHSILTWALLHSRSFQDAENLILTHFTHSHPRIWDTLIRTHHDPQRALFLLRYCLQNGAVLPSPLTFSSLIHRLSSQGDLGMAMEALEIMTDHRVRYPFDDFVCSSVISGFCRIGKPELALGFYDNAVGSGALLRPGLVTLTAIVGALVRLGRLDEVCGLVRRMEEDGIGLDVVLYSVWVCGYVKGNDLVEVFRKMREMVVVKGIDHDHVSYTILIDGFSKLGDVEKSFGILAKMIKEGKRPNKVTYTAIISAYCKKGKVEEARGVFDRIGELGIELDEFVYAVLIDGYCWIGDFGSVFKLFVEMEKRGVSPSVVTYNTIINGLCKFGRTSEADELSKDVAADVITYSTLLHGYTEEENTPGILQTKRRLEEAGIAMDIIMCNVLIKALFMMGAFEDVYALYKGMPEMGLVPNSVTYCTMIDQYCKVGRIDEALVVFDDFRKTSFSSPVCYTSIIHGLCKKGMVEMAIEALVELNDKGLELSRYTFRMLMRTILTEKGAKEVLDLVYTMEGLGQDLYESVCNDAIFLLCRRGFLEDAYRLCLMMRKTGLYVTRNSYYSVLRSYLSNRNREHMLPLLNIFLKEYGLVDPMMRRILACYLCLKDIHSPLQFMGKTISLPVSILRVLIKEGRALDAYKLVVKTQDSLQVMYADYAILIDALCKGGYLNKALDLCAFVEKKGITLDIVVYNSIINGLCHEGRLTEAFRLFDSLEKLNLIPSEITYATLIYALSREGYLVDAEHVFSKMVLKGFQPKTQVYNSLLEGISKFGQLENALELLNDMETKYIEPDSLTVSAVINCHCQKGNMEGALQFYYKFKRKDVSPDFFGFLYLIRGLCSKGRMEEARSVLREMLKSKNIEEIINIVNNEVDNESIGGFLAILCEQGSIQEALAVLNEIASTLYPVLRLSTYNQGAHAQRNISELNAGLQSSRRLSSSCRTGLDFGSCDASDESDLTINNDSHVTRSRPLNFDFYYSVIATHCAKGELQKANQVAKGMLSHLSRGAEHKKEERK* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1169 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 857 891 IPR002885 -
Ahy4g1169 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 278 312 IPR002885 -
Ahy4g1169 1079 PANTHER ATPASE EXPRESSION PROTEIN 3 689 749 - -
Ahy4g1169 1079 Gene3D Tetratricopeptide repeat domain 803 942 IPR011990 GO:0005515
Ahy4g1169 1079 PANTHER ATPASE EXPRESSION PROTEIN 3 745 1068 - -
Ahy4g1169 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 170 204 IPR002885 -
Ahy4g1169 1079 PANTHER FERTILITY RESTORER-LIKE 62 564 - -
Ahy4g1169 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 313 347 IPR002885 -
Ahy4g1169 1079 PANTHER FERTILITY RESTORER-LIKE 745 1068 - -
Ahy4g1169 1079 PANTHER FERTILITY RESTORER-LIKE 689 749 - -
Ahy4g1169 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 822 856 IPR002885 -
Ahy4g1169 1079 Pfam PPR repeat family 821 870 IPR002885 -
Ahy4g1169 1079 Pfam PPR repeat family 519 561 IPR002885 -
Ahy4g1169 1079 Pfam PPR repeat family 348 396 IPR002885 -
Ahy4g1169 1079 Pfam PPR repeat family 752 799 IPR002885 -
Ahy4g1169 1079 Gene3D Tetratricopeptide repeat domain 517 585 IPR011990 GO:0005515
Ahy4g1169 1079 Gene3D Tetratricopeptide repeat domain 682 802 IPR011990 GO:0005515
Ahy4g1169 1079 Gene3D Tetratricopeptide repeat domain 435 516 IPR011990 GO:0005515
Ahy4g1169 1079 Gene3D Tetratricopeptide repeat domain 343 434 IPR011990 GO:0005515
Ahy4g1169 1079 Gene3D Tetratricopeptide repeat domain 15 204 IPR011990 GO:0005515
Ahy4g1169 1079 PANTHER ATPASE EXPRESSION PROTEIN 3 62 564 - -
Ahy4g1169 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 207 241 IPR002885 -
Ahy4g1169 1079 Gene3D Tetratricopeptide repeat domain 258 342 IPR011990 GO:0005515
Ahy4g1169 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 752 786 IPR002885 -
Ahy4g1169 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 483 517 IPR002885 -
Ahy4g1169 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 348 382 IPR002885 -
Ahy4g1169 1079 Pfam Pentatricopeptide repeat domain 408 458 IPR002885 -
Ahy4g1169 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 787 821 IPR002885 -
Ahy4g1169 1079 Pfam PPR repeat 136 163 IPR002885 -
Ahy4g1169 1079 Pfam PPR repeat 173 196 IPR002885 -
Ahy4g1169 1079 Pfam PPR repeat 721 749 IPR002885 -
Ahy4g1169 1079 Pfam PPR repeat 209 239 IPR002885 -
Ahy4g1169 1079 Pfam PPR repeat 888 919 IPR002885 -
Ahy4g1169 1079 Pfam PPR repeat 478 508 IPR002885 -
Ahy4g1169 1079 Pfam PPR repeat 309 339 IPR002885 -
Ahy4g1169 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 892 922 IPR002885 -
Ahy4g1169 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 383 413 IPR002885 -
Ahy4g1169 1079 TIGRFAM PPR: pentatricopeptide repeat domain 754 787 IPR002885 -
Ahy4g1169 1079 TIGRFAM PPR: pentatricopeptide repeat domain 385 406 IPR002885 -
Ahy4g1169 1079 TIGRFAM PPR: pentatricopeptide repeat domain 280 313 IPR002885 -
Ahy4g1169 1079 TIGRFAM PPR: pentatricopeptide repeat domain 899 923 IPR002885 -
Ahy4g1169 1079 TIGRFAM PPR: pentatricopeptide repeat domain 209 242 IPR002885 -
Ahy4g1169 1079 TIGRFAM PPR: pentatricopeptide repeat domain 860 892 IPR002885 -
Ahy4g1169 1079 TIGRFAM PPR: pentatricopeptide repeat domain 315 349 IPR002885 -
Ahy4g1169 1079 TIGRFAM PPR: pentatricopeptide repeat domain 519 551 IPR002885 -
Ahy4g1169 1079 TIGRFAM PPR: pentatricopeptide repeat domain 451 483 IPR002885 -
Ahy4g1169 1079 TIGRFAM PPR: pentatricopeptide repeat domain 789 821 IPR002885 -
Ahy4g1169 1079 TIGRFAM PPR: pentatricopeptide repeat domain 351 384 IPR002885 -
Ahy4g1169 1079 TIGRFAM PPR: pentatricopeptide repeat domain 485 515 IPR002885 -
Ahy4g1169 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 448 482 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1169 Ahy-Chr4 30872128 30883045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1169 592 962 Glycosyltransferase AT1G05670 25.936 1.25e-30 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1169 - K17964 gmx:100783405 1437.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1260 14 28794508 28812353 Ahy4g1169 4 30872128 30883045 hybridization