Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1260 ATGAGGGAAATGGTGGTGGTGAAGGGTATCGATCATGATCATGTGAGTTATACTATACTCATTGATGGGTTTTCTAAGTTAGGCGATGTGGAGAAGTCATTTGGGATCTTGGCTAAGATGATAAAGGAAGGGAAGAGACCCAATAAGGTCACTTACACTGCAATAATATCTGCTTATTGTAAGAAGGGTAAAGTTGAGGAAGCACGTGGTGTTTTTGAGAGGATAGGTGAGTTGGGAATTGAGTTGGATGAGTTTGTGTATGCAGTTTTGATTGATGGATATTGTCGGATTGGAGATTTTGGTAGTGTCTTTAAGCTATTTGTTGAAATGGAGAAAAGAGGGGTTAGTCCTAGTGTTGTTACGTATAATACCATAATAAATGGTTTGTGCAAGTTCGGGAGGACGTCTGAGGCGGATGAGTTATCGAAAGATGTGGCTGCAGATGTGATTACGTACAGCACGTTGTTGCATGGTTATACTGAAGAAGAGAACACTCTGGGGATTTTGCAGACAAAGAGGCGACTAGAAGAAGCTGGAATCGCCATGGATATCATAATGTGCAATGTGCTGATCAAAGCATTGTTTATGATGGGGGCTTTTGAAGATGTTTATGCTCTTTACAAAGGAATGCCGGAAATGGGCCTGGTTCCGAATTCTGTTACTTATTGCACAATGATTGATCAGTATTGCAAGGTAGGTAGAATTGACGAGGCACTTGTGGTATTTGATGACTTCAGAAAAACATCATTCTCTTCACCTGTATGCTACACTAGTATTATTCATGGACTCTGCAAGAAGGGTATGGTAGAAATGGCCATTGAGGCATTAGCCGAACTCAATGATAAAGGACTGGAGTTAAGTAGATATACATTTAGGATGTTAATGAGGACACTTCTCACTGAAAAGGGTGCAAAAGAGGTTTTAGATTTAGTTTACACAATGGAAGGATTGGGCCAAGACTTATATGAGTCAGTATGTAATGATGCAATCTTTTTATTATGCAGAAGAGGATTTCTTGAGGATGCATATCGCTTGTGCTTGATGATGAGAAAGACAGGTTTATACGTTACAAGAAATTCTTATTATTCTGTTTTAAGAAGCTATCTTAGTAACAGGAATAGGGAGCACATGCTACCCCTATTGAATATCTTTCTAAAAGAATATGGCCTAGTTGATCCAATGATGCGAAGGATACTAGCATGCTACCTATGCTTAAAAGATATCCATAATCCCCTTCAATTTATGGGAAAAACAATCTCTCTTCCTGTCGCCATCTTCAGGATTCTGATAAAGGAAGGTAGAGCTTTAGATGCATATAAGCTTGTGGTAAAGACTCAAGATAGTTTACAAGTCATGTATGCTGATTATGCCATTCTGATTGATGCCTTATGCAAGGGAGGATATCTCAATAAAGCATTGGATCTTTGTGCCTTCGTTGAAAAGAAAGGGATCACTTTGGACATAGTTGTATATAATTCTATAATAAATGGATTGTGCCATGAGGGACGTCTTATTGAAGCATTTCGGCTATTTGATTCATTGGAGAAACTTAATTTGATACCATCTGAAATAACTTATGCCACATTAATTTATGCACTAAGTAGGGAGGGATATCTGGTAGATGCTGAGCATGTTTTCAGTAAAATGGTCCTGAAGGGCTTTCAACCAAAAACACAAGTTTATAATTCACTACTTGAGGGTATTTCAAAGTTTGGTCAATTAGAGAATGCGCTCGAGCTTCTAAACGATTTGGAGACAAAATATATTGAGCCTGACAGCTTGACGGTTAGTGCTGTCATAAATTGCCATTGCCAAAAGGGCAACATGGAAGGAGCACTTCAATTCTATTATAAGTTCAAGAGGAAGGATGTATCACCTGATTTTTTTGGGTTCTTGTACTTGATAAGAGGCTTATGTTCAAAGGGACGGATGGAAGAAGCTAGGAGTGTCTTGAGAGAAATGCTCAAATCGAAGAATATTGAAGAGATAATTAACATAGTTAACAATGAGGTTGATAATGAGTCAATAGGTGGCTTTCTTGCCATTTTGTGTGAGCAAGGAAGTATTCAAGAAGCCCTTGCAGTTCTCAATGAAATTGCAAGCACGCTTTATCCTGTTCTAAGGTTATCTACATATAATCAAGGAGCTCACGCACAGAGGAACATTTCTGAGCTGAACGCTGGTTTACAATCTTCAAGGCGTCTATCCTCCTCTTGTAGAACTGGTTTGGATTTTGGATCTTGTGATGCTAGCGATGAAAGTGATCTTACAATAAATAATGATAGTCATGTGACAAGGTCCCGGCCACTCAATTTCGACTTCTATTATTCCATGATTGCCACACATTGTGCCAAAGGGGAGCTACAGAAAGCTAATCAAGTAGCTAAGGGAATGCTTTCCCACCTAAGTCGAGGAGCTGAACATAAGAAAGAAGAGAGAAAATGA 2445 0.3894 MREMVVVKGIDHDHVSYTILIDGFSKLGDVEKSFGILAKMIKEGKRPNKVTYTAIISAYCKKGKVEEARGVFERIGELGIELDEFVYAVLIDGYCRIGDFGSVFKLFVEMEKRGVSPSVVTYNTIINGLCKFGRTSEADELSKDVAADVITYSTLLHGYTEEENTLGILQTKRRLEEAGIAMDIIMCNVLIKALFMMGAFEDVYALYKGMPEMGLVPNSVTYCTMIDQYCKVGRIDEALVVFDDFRKTSFSSPVCYTSIIHGLCKKGMVEMAIEALAELNDKGLELSRYTFRMLMRTLLTEKGAKEVLDLVYTMEGLGQDLYESVCNDAIFLLCRRGFLEDAYRLCLMMRKTGLYVTRNSYYSVLRSYLSNRNREHMLPLLNIFLKEYGLVDPMMRRILACYLCLKDIHNPLQFMGKTISLPVAIFRILIKEGRALDAYKLVVKTQDSLQVMYADYAILIDALCKGGYLNKALDLCAFVEKKGITLDIVVYNSIINGLCHEGRLIEAFRLFDSLEKLNLIPSEITYATLIYALSREGYLVDAEHVFSKMVLKGFQPKTQVYNSLLEGISKFGQLENALELLNDLETKYIEPDSLTVSAVINCHCQKGNMEGALQFYYKFKRKDVSPDFFGFLYLIRGLCSKGRMEEARSVLREMLKSKNIEEIINIVNNEVDNESIGGFLAILCEQGSIQEALAVLNEIASTLYPVLRLSTYNQGAHAQRNISELNAGLQSSRRLSSSCRTGLDFGSCDASDESDLTINNDSHVTRSRPLNFDFYYSMIATHCAKGELQKANQVAKGMLSHLSRGAEHKKEERK* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1260 814 Gene3D Tetratricopeptide repeat domain 77 166 IPR011990 GO:0005515
Ahy14g1260 814 Gene3D Tetratricopeptide repeat domain 417 535 IPR011990 GO:0005515
Ahy14g1260 814 Gene3D Tetratricopeptide repeat domain 167 251 IPR011990 GO:0005515
Ahy14g1260 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 118 148 IPR002885 -
Ahy14g1260 814 Gene3D Tetratricopeptide repeat domain 536 747 IPR011990 GO:0005515
Ahy14g1260 814 PANTHER FERTILITY RESTORER-LIKE 7 298 - -
Ahy14g1260 814 Pfam PPR repeat family 254 298 IPR002885 -
Ahy14g1260 814 Pfam PPR repeat family 556 605 IPR002885 -
Ahy14g1260 814 Pfam PPR repeat family 487 534 IPR002885 -
Ahy14g1260 814 Pfam PPR repeat family 83 131 IPR002885 -
Ahy14g1260 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 48 82 IPR002885 -
Ahy14g1260 814 PANTHER ATPASE EXPRESSION PROTEIN 3 480 803 - -
Ahy14g1260 814 TIGRFAM PPR: pentatricopeptide repeat domain 489 522 IPR002885 -
Ahy14g1260 814 TIGRFAM PPR: pentatricopeptide repeat domain 595 627 IPR002885 -
Ahy14g1260 814 TIGRFAM PPR: pentatricopeptide repeat domain 15 48 IPR002885 -
Ahy14g1260 814 TIGRFAM PPR: pentatricopeptide repeat domain 634 658 IPR002885 -
Ahy14g1260 814 TIGRFAM PPR: pentatricopeptide repeat domain 120 141 IPR002885 -
Ahy14g1260 814 TIGRFAM PPR: pentatricopeptide repeat domain 524 556 IPR002885 -
Ahy14g1260 814 TIGRFAM PPR: pentatricopeptide repeat domain 50 84 IPR002885 -
Ahy14g1260 814 TIGRFAM PPR: pentatricopeptide repeat domain 254 286 IPR002885 -
Ahy14g1260 814 TIGRFAM PPR: pentatricopeptide repeat domain 220 250 IPR002885 -
Ahy14g1260 814 TIGRFAM PPR: pentatricopeptide repeat domain 86 119 IPR002885 -
Ahy14g1260 814 TIGRFAM PPR: pentatricopeptide repeat domain 186 218 IPR002885 -
Ahy14g1260 814 PANTHER ATPASE EXPRESSION PROTEIN 3 429 484 - -
Ahy14g1260 814 Pfam PPR repeat 213 243 IPR002885 -
Ahy14g1260 814 Pfam PPR repeat 44 74 IPR002885 -
Ahy14g1260 814 Pfam PPR repeat 623 654 IPR002885 -
Ahy14g1260 814 Pfam PPR repeat 456 484 IPR002885 -
Ahy14g1260 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 522 556 IPR002885 -
Ahy14g1260 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 83 117 IPR002885 -
Ahy14g1260 814 Gene3D Tetratricopeptide repeat domain 252 320 IPR011990 GO:0005515
Ahy14g1260 814 Gene3D Tetratricopeptide repeat domain 1 76 IPR011990 GO:0005515
Ahy14g1260 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 13 47 IPR002885 -
Ahy14g1260 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 487 521 IPR002885 -
Ahy14g1260 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 218 252 IPR002885 -
Ahy14g1260 814 PANTHER FERTILITY RESTORER-LIKE 480 803 - -
Ahy14g1260 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 592 626 IPR002885 -
Ahy14g1260 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 183 217 IPR002885 -
Ahy14g1260 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 557 591 IPR002885 -
Ahy14g1260 814 PANTHER ATPASE EXPRESSION PROTEIN 3 7 298 - -
Ahy14g1260 814 PANTHER FERTILITY RESTORER-LIKE 429 484 - -
Ahy14g1260 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 627 657 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1260 Ahy-Chr14 28794508 28812353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1260 454 799 Glycosyltransferase AT1G05670 27.714 5.42e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1260 - K17964 gmx:100783405 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1260 14 28794508 28812353 Ahy4g1169 4 30872128 30883045 hybridization