Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1047 ATGATGAGATTTTTAATCTCATTCTTACCCTTTTTCTTCTTGGTGGTGGTACTACAAGAAGCCACTTGCTTCAATCAACACAAAGAACTTTCTCATAATATTAGAAACAAACTCAAGGGTAGATTGGCCATTTCCCTCTCTCATTCACCATCACAAACGGCAAAGGCAAGAAGCAGAGTGGTGTACCCGGCGGAGTATGGCGCAGACACGAGCGGAGCACGTGACAGCAGCGACGCAATTATAAAGGCATTGGAGGATGCATTCAGTTTGGAGAGTGAGGCGGAGCTGCTTCCGGGGGTTAAAGACCTTGGGGGTGTATTGGTGGACCTGCAAGGTGGGAACTACACAATTAGCAAGCCCATCAAATTCCCTTCTTCTGCTGCTGGCAATCTTGTGGTACAAGGAGGAACGTTGAGAGCCTCTGATGCATTTCCCACTGATCGCCATCTAGTTGAGTTATGGGCATCTAGTTCCCAAAAGCTCTCAAAAACAGCATCATTTGATGACTTGTACAACAGGAAACTTCAGCAACCTAAAGGGATTTACTACGAAGACATAACATTCCGGGACATTCTATTCGATTCGGGCTACCATGGAGGAGGAATTTTTGTAGTTGATTCCGCTAGGATCCGAATCAACAACTGTTTCTTCCTCCATTTCACTACAGAGGGAATCCTAGTCCAAGGTGGCCACGAAACTTACATATCTAGCTGCTTTCTTGGGCAACACTCAACCGTAGGCGGGGACTCCGGCGAGCGACAATTCTCGGGAACTGCGATTGAACTTGCTAGCAATGATAACGCAATCACCGATATTGCGATCTTCTCGTCCGCCGTAGGGATTGTCCTAAGGGGCCAAGCCAACATCGTTACCGGGGTCCATTGTTACAATAAGGCCACCGGTTTTGGTGGCATAGGAATCTTGGTAATGCTAGCCGGAAATTCACAAACAAGAATTGATAATTGTTACATGGATTACACAGCAATTGTGATGGAAGACCCTGTTCAAGTTCATGTCACTAATGGATTTTTCTTGGGGGATGCTAACATTGTTTTGAAATCAATTAAGGGACAAATATCAGGATTGAAGATAGTCAATAATATGTTCACTGGGAACCCTAACGCTAAAGTTCCAATTGTGGCATTAGATGGAGTGTTTGGTAACGTTGACCAGGTGGTCATTGATTTGAACAGTGTTGATGGAATGGGGTTGAGATCAACGGTTGGGAAGCAATCTGTGGCTGGGAATGGAACAAAATGGGTGGCTGATTTTTCAGGGGTTTTGGTGTTCCCTAATAGGATAAATCACATTCAATATTCATTTTATTCTCAGGGGGGACCTAATAATAATAACAATAATAAGTTTGTACCACATGCAGTGACCAATGTTACAAATAATGTCGTGGTTGTGGAAAGTGATAAACCGGTTAATGGGGTTGTTTCATTCCTAGTTGAGCAATGA 1461 0.4401 MMRFLISFLPFFFLVVVLQEATCFNQHKELSHNIRNKLKGRLAISLSHSPSQTAKARSRVVYPAEYGADTSGARDSSDAIIKALEDAFSLESEAELLPGVKDLGGVLVDLQGGNYTISKPIKFPSSAAGNLVVQGGTLRASDAFPTDRHLVELWASSSQKLSKTASFDDLYNRKLQQPKGIYYEDITFRDILFDSGYHGGGIFVVDSARIRINNCFFLHFTTEGILVQGGHETYISSCFLGQHSTVGGDSGERQFSGTAIELASNDNAITDIAIFSSAVGIVLRGQANIVTGVHCYNKATGFGGIGILVMLAGNSQTRIDNCYMDYTAIVMEDPVQVHVTNGFFLGDANIVLKSIKGQISGLKIVNNMFTGNPNAKVPIVALDGVFGNVDQVVIDLNSVDGMGLRSTVGKQSVAGNGTKWVADFSGVLVFPNRINHIQYSFYSQGGPNNNNNNKFVPHAVTNVTNNVVVVESDKPVNGVVSFLVEQ* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1047 486 PANTHER POLYGALACTURONASE QRT3 2 486 IPR039279 GO:0004650
Ahy4g1047 486 SUPERFAMILY Pectin lyase-like 1 472 IPR011050 -
Ahy4g1047 486 Gene3D - 64 480 IPR012334 -
Ahy4g1047 486 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 2 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1047 Ahy-Chr4 21553229 21555327 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1047 - - gmx:100802482 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1147 14 21950501 21952556 Ahy4g1047 4 21553229 21555327 hybridization