Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1147 ATGATGAAATTTTTAATCTCATTCTTACCCTTTTTCTTCTTGGTGGTGGTACAACAAGAAGCCACTTGCTTCAATCAACACAAAGAACTTTCTCATAATATTAGAAACAAACTCAAGGGTAGATTGGCCATTTCCCTCTCTCATCCACCATCACAAACGGCAAAGGGAGGAAGCAGAGTGGTGTACCCGGCGGAGTACGGCGCAGACACGAGCGGAGCACGTGACAGCAGCGACGCAATTATAAAGGCATTGGAGGATGCATTCAGTTTGGAGAGTGAGGCGGAGCTGCTTCCGGGGGTTAAAGACCTTGGGGGTGTATTGGTTGACCTGCAAGGTGGGAACTACACAATTAGCAAGCCCATCAAATTCCCTTCTTCTGCTGCTGGCAATCTTGTGGTACAAGGAGGAACGTTGAGAGCTTCTGATGCATTTCCCACTGATGGCCATCTAGTTGAGTTATGGGCATCTAGTTCCCAAAAGCTCTCGAAAACAGCATCATTTGATGACTTGTACAACAAGAAACTTCAGCAACCTAAAGGGATTTACTACGAAGACATAACATTCCGTGACATTCTATTCGATTCGGGCTACCATGGAGGAGGAATCTTTGTAGTTGATTCGGCTAGGATCCGAATCAACAACTGTTTCTTCCTCCATTTCACTACAGAGGGAATCCTAGTCCAAGGTGGCCACGAAACTTACATATCTAGCTGCTTTCTTGGGCAACACTCAACCGTAGGAGGGGACTCCGGCGAGCGACAATTCTCGGGAACTGCGATTGAACTTGCTAGCAATGATAACGCAATTACCGATATTGCGATCTTCTCGTCTGCCATAGGGATTGTCCTAAGGGGCCAAGCCAACATCGTTACCGGGGTCCATTGTTACAATAAGGCCACCGGTTTTGGTGGCATAGGAATCTTGGTAATGCTAGCCGGAAATTCACAAACAAGAATTGATAATTGTTACATGGATTACACAACAATTGTGATGGAAGACCCTGTTCAAGTTCATGTCACTAATGGATTTTTCTTGGGGGATGCTAACATTGTTTTGAAATCAATTAAGGGACAAATATCAGGATTGAAGATAGTCAATAATATGTTCACTGGGAACCCTAACGCTAAAGTTCCAATTGTGGCATTAGATGGAGTGTTTGGTAACGTTGACCAGGTGGTCATTGATTTGAACAGTGTTGATGGAATGGGGTTGAGATCAACGGTTGGGAAGCAATCTGTGGCTGGGAATGGAACAAAATGGGTGGCTGATTTTTCAGGAATTTTGGTGTTCCCTAATAGGATAAATCACTTTCAATATTCATTTTATTCTCAGGGGGGACCTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAGTTTGTAACACATGCAGTGACCAATGTTACAAATAATGTTGTGGTTGTGGAAAGTGATAAACCGGTTAATGGGGTTGTTTCATTCTTAGTTGAACAATGA 1506 0.419 MMKFLISFLPFFFLVVVQQEATCFNQHKELSHNIRNKLKGRLAISLSHPPSQTAKGGSRVVYPAEYGADTSGARDSSDAIIKALEDAFSLESEAELLPGVKDLGGVLVDLQGGNYTISKPIKFPSSAAGNLVVQGGTLRASDAFPTDGHLVELWASSSQKLSKTASFDDLYNKKLQQPKGIYYEDITFRDILFDSGYHGGGIFVVDSARIRINNCFFLHFTTEGILVQGGHETYISSCFLGQHSTVGGDSGERQFSGTAIELASNDNAITDIAIFSSAIGIVLRGQANIVTGVHCYNKATGFGGIGILVMLAGNSQTRIDNCYMDYTTIVMEDPVQVHVTNGFFLGDANIVLKSIKGQISGLKIVNNMFTGNPNAKVPIVALDGVFGNVDQVVIDLNSVDGMGLRSTVGKQSVAGNGTKWVADFSGILVFPNRINHFQYSFYSQGGPNNNNNNNNNNNNNNNNNNNNNKFVTHAVTNVTNNVVVVESDKPVNGVVSFLVEQ* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1147 501 MobiDBLite consensus disorder prediction 445 469 - -
Ahy14g1147 501 PANTHER POLYGALACTURONASE QRT3 465 501 IPR039279 GO:0004650
Ahy14g1147 501 Gene3D - 64 495 IPR012334 -
Ahy14g1147 501 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 6 451 - -
Ahy14g1147 501 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 465 501 - -
Ahy14g1147 501 PANTHER POLYGALACTURONASE QRT3 6 451 IPR039279 GO:0004650
Ahy14g1147 501 SUPERFAMILY Pectin lyase-like 60 377 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1147 Ahy-Chr14 21950501 21952556 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1147 - - gmx:100802482 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1147 14 21950501 21952556 Ahy4g1047 4 21553229 21555327 hybridization