Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1045 ATGGCCACACATCTAGAATGCTTCTTCCTCAAACTTGAGCCCCTTCTCACAATGGCAAGAACATTTCTAGTTTGGTTCTTGTGTCTTGGGGTGCCTTGTTTCTTTGTAATTATTGATGGTGGAGTTTATGGAGATCATCAGAACTTGCATCCAAGAACCATTTCTGGTGCCAATCACTACCATAAAGATATAAGAAGATTACAAGCCTTTAAGGCCTCTCTTACTAGACATGCTTCTGTTGCTTCAACACCTTCTTCATTTTCATCCTCTTCTGCTTCTTCCCCTTTGCTATCTGAGGGTGTGAACAATCCACGTGTATACCACGTGACATCGTATGGGGCAGATCCAAGTGGGAATTCAGACAGCACAGAAGCAATTCTTGCAGCCATAGCAGATGCAGCCAAGGTTTCAAGTCAAGGACAGTTGATGCAGGGCATCACTGATCTTGGAGGTGTCCATGTTGATCTTGAGGGTGGTAGCTACCTCATCAGCCGTCCACTGCGCTTGCCGGCCGCCCGTCTAGGGAATCTCATGATACATGGTGGAACTATAAGAGCCTCAAATAACTTTCCAGAAGATGGGTACCTCATTGATTTGTCATCAACCTCTTCTTCTTCTTCTTCTAATAATAATAATAATAATAATAATAATAATGAGAACAATGGAGCTAACTCAGAGAGTTCCCGTTCTTCACGCTACAATTTTGAGTACATAAGCTTCAAGGACCTCTTGTTAGACTCAAACTTCAGAGGTGGGGGCATTTCAGTAATTAACTCACTCAGAACTAACATAGACAATTGTTACATTACACACTTCACCACAAATGGAATTTTAGTCCAAAGTGGTCATGAGACATACATTAGAAACACTTTTCTTGGCCAGTACGTAACCGCAGGAGGTGATAAAAATGAAAAGAATTTCTCCGGGACCGGAATAAGTCTCCTCGGCAACGATAACGCCGTCACGGATGTTGTCATTTTCTCTGCAGCTATAGGAATAATGGTAACCGGTCAGGCCAACACGTTCTCTGGCGTGCATTGTTACAATAAGGCCACCGGATTTGGAGGGACCGGGATATATCTGAAGCTGCCGGGGCTAACACAGACAAGGATTGTGAATTCTTACATGGATTACACGAGTATCGTCGCCGAGGATCCGGTCCAGCTCCATGTCTCTAGCAGTTTCTTCCTTGGTGATGCCAATATTGTCCTTAAATCAGTGAATGGTGTTGTGAATGGAGTCAGCATTGTTGATAACATGTTTTCAGGGTCCGGTTCTGGGGTGGAGATTGTTCAATTGGACCAATCAAAGAACAGTTTCAACCAAATTGATCAAGCTATTGTTGATAGGAACATTGTGAGGGGAATGAATTTGAAGGCCACAGTGGCAAAAATGTCAATTCAAGGGAATGGAACATTATGGAATGTTGATTTTAGTAATGTTCTGCTTTTTCCAAACCTTATCAGAAATGTTCAGTACTCATTAAGCTCTAGTGGTGGAACATTCCCTAATCATGCTTTGAGGAATGTATCTGAGAACAAGGTTGTGATTGAAACAAGTGAAGCAGTGGATGCAAATGTTTTTGTTACTGTGGATCAGAGTATGGTAATTTGA 1614 0.4232 MATHLECFFLKLEPLLTMARTFLVWFLCLGVPCFFVIIDGGVYGDHQNLHPRTISGANHYHKDIRRLQAFKASLTRHASVASTPSSFSSSSASSPLLSEGVNNPRVYHVTSYGADPSGNSDSTEAILAAIADAAKVSSQGQLMQGITDLGGVHVDLEGGSYLISRPLRLPAARLGNLMIHGGTIRASNNFPEDGYLIDLSSTSSSSSSNNNNNNNNNNENNGANSESSRSSRYNFEYISFKDLLLDSNFRGGGISVINSLRTNIDNCYITHFTTNGILVQSGHETYIRNTFLGQYVTAGGDKNEKNFSGTGISLLGNDNAVTDVVIFSAAIGIMVTGQANTFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHVSSSFFLGDANIVLKSVNGVVNGVSIVDNMFSGSGSGVEIVQLDQSKNSFNQIDQAIVDRNIVRGMNLKATVAKMSIQGNGTLWNVDFSNVLLFPNLIRNVQYSLSSSGGTFPNHALRNVSENKVVIETSEAVDANVFVTVDQSMVI* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1045 537 Gene3D - 106 536 IPR012334 -
Ahy4g1045 537 SMART pbh1 259 281 IPR006626 -
Ahy4g1045 537 SMART pbh1 411 432 IPR006626 -
Ahy4g1045 537 SMART pbh1 316 337 IPR006626 -
Ahy4g1045 537 SMART pbh1 174 199 IPR006626 -
Ahy4g1045 537 MobiDBLite consensus disorder prediction 201 228 - -
Ahy4g1045 537 SUPERFAMILY Pectin lyase-like 105 350 IPR011050 -
Ahy4g1045 537 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 217 534 - -
Ahy4g1045 537 PANTHER POLYGALACTURONASE QRT3 217 534 IPR039279 GO:0004650
Ahy4g1045 537 PANTHER POLYGALACTURONASE QRT3 18 210 IPR039279 GO:0004650
Ahy4g1045 537 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 18 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1045 Ahy-Chr4 21482421 21486172 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1045 - - ahf:112741808 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1144 14 21844581 21848204 Ahy4g1045 4 21482421 21486172 hybridization