Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1144 ATGGCCACACATCTAGAATGCTTCTTCCTCAAACTTGAGCCCCTTCTCACAATGGCAAGAACATTTCTAGTTTGGTTCTTGTGTCTTGGGGTGCCTTGTTTCTTTGTAATTATTGATGGTGGAGTTTATGGAGATCAGAACTTGCATCCAAGAACCATTTCTGGTGCCAATCACTACCATAAAGATATAAGAAGATTACAAGCCTTTAAGGCCTCTCTTACTAGACATGGTTCTGTTGCTTCAACATCTTCTTCATTTTCATCCTCTTTTGCTTCTTCCCCTTTGCTATCTGAGGGTGTGAACAATCCACGCGTATACCACGTGACATCGTATGGGGCAGATCCAAGTGGGAATTCAGACAGCACAGAAGCAATTCTTGCAGCCATAGCAGATGCAGCCAAGGTTCCAAGTCAAGGACAGTTGATGCAGGGCATCACTGATCTTGGAGGTGCCCATGTTGATCTTGAGGGTGGTAGCTACCTCATCAGCCGTCCACTGCGCTTGCCGGCCGCCCGTCTAGGGAACCTCATGATACATGGTGGAACTATAAGAGCCTCAAATAACTTTCCAGAAGATGGGTACCTCATTGATTTGTCACCAACCTCTTCTTCTTCTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATCATAATGAGAAGAATGGAGCTAACTCAGAGAGTTCCCGTTCTTCACCCTACAATTTTGAGTACATAAGCTTGAAGGACCTCTTGTTAGACTCAAACTTCAGAGGTGGGGGCATTTCAGTAATTAACTCACTCAGAACTAACATAGACAACTGTTACATTACACACTTCACCACAAATGGAATTTTAGTCCAAAGTGGTCATGAGACATACATTAGAAACACTTTTCTTGGCCAGTACGTAACCGCTGGAGGTGATAAAAATGAAAAGAATTTCTCCGGGACCGGAATAAGTCTCCTCGGCAACGATAACGCCGTCACGGATGTTGTCATCTTCTCTGCAGCTATAGGAATAATGGTAACGGGTCAGGCCAACACGTTCTCCGGCGTGCATTGTTACAATAAGGCCACCGGATTCGGAGGGACCGGGATATATCTGAAGCTGCCGGGGCTAACACAGACAAGGATTGTGAATTCTTACATGGATTACACGAGTATCGTCGCCGAGGATCCGGTCCAGCTCCATGTCTCTAGCAGTTTCTTCCTTGGTGATGCCAACATTGTCCTTAAATCAGTGAAAGGTGTTGTGAATGGAGTCAGCATTGTTGATAACATGTTTTCAGGGTCCAGTTCTGGGGTGGAGATTGTTCAATTGGACCAATCAAACAACAGTTTCAACCAAATTGATCAAGCTATTGTTGATAGGAACATTGTGAGGGGAATGAATTTGAAGGCCACAGTGGCAAAAATGTCAATTCGAGGGAATGGAACATTATGGAATGTTGATTTTAGTAATGTTCTGCTTTTTCCAAACCTTATCAGAAATGTTCAGTACTCATTAAGCTCTAGTGGTGGAACATTCCCTAATCATGCTTTGAGGAATGTATCTGAGAACAAGGTTGTGATTGAAACAAGTGAAGCAGTGGATGCAAATGTTTTTGTTACTGTGGATCAGAGTATGGTAAATTGA 1638 0.4206 MATHLECFFLKLEPLLTMARTFLVWFLCLGVPCFFVIIDGGVYGDQNLHPRTISGANHYHKDIRRLQAFKASLTRHGSVASTSSSFSSSFASSPLLSEGVNNPRVYHVTSYGADPSGNSDSTEAILAAIADAAKVPSQGQLMQGITDLGGAHVDLEGGSYLISRPLRLPAARLGNLMIHGGTIRASNNFPEDGYLIDLSPTSSSSNNNNNNNNNNNNNNNNNNNHNEKNGANSESSRSSPYNFEYISLKDLLLDSNFRGGGISVINSLRTNIDNCYITHFTTNGILVQSGHETYIRNTFLGQYVTAGGDKNEKNFSGTGISLLGNDNAVTDVVIFSAAIGIMVTGQANTFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHVSSSFFLGDANIVLKSVKGVVNGVSIVDNMFSGSSSGVEIVQLDQSNNSFNQIDQAIVDRNIVRGMNLKATVAKMSIRGNGTLWNVDFSNVLLFPNLIRNVQYSLSSSGGTFPNHALRNVSENKVVIETSEAVDANVFVTVDQSMVN* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1144 545 PANTHER POLYGALACTURONASE QRT3 230 543 IPR039279 GO:0004650
Ahy14g1144 545 SMART pbh1 267 289 IPR006626 -
Ahy14g1144 545 SMART pbh1 324 345 IPR006626 -
Ahy14g1144 545 SMART pbh1 173 198 IPR006626 -
Ahy14g1144 545 SMART pbh1 419 440 IPR006626 -
Ahy14g1144 545 MobiDBLite consensus disorder prediction 196 236 - -
Ahy14g1144 545 MobiDBLite consensus disorder prediction 197 236 - -
Ahy14g1144 545 PANTHER POLYGALACTURONASE QRT3 18 209 IPR039279 GO:0004650
Ahy14g1144 545 Gene3D - 105 545 IPR012334 -
Ahy14g1144 545 SUPERFAMILY Pectin lyase-like 104 515 IPR011050 -
Ahy14g1144 545 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 230 543 - -
Ahy14g1144 545 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 18 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1144 Ahy-Chr14 21844581 21848204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1144 - - ahf:112741808 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1144 14 21844581 21848204 Ahy4g1045 4 21482421 21486172 hybridization